Gene Rleg2_5508 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg2_5508 
Symbol 
ID6978602 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM2304 
KingdomBacteria 
Replicon accessionNC_011368 
Strand
Start bp1158350 
End bp1158739 
Gene Length390 bp 
Protein Length129 aa 
Translation table11 
GC content61% 
IMG OID643394607 
ProductCarboxymuconolactone decarboxylase 
Protein accessionYP_002279425 
Protein GI209547507 
COG category[S] Function unknown 
COG ID[COG0599] Uncharacterized homolog of gamma-carboxymuconolactone decarboxylase subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.000984625 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGATGAGA CACTCAGAAA GAGCGGCGAG GCCGTCAGGC GCAAGGTTCT CGGCGACGAC 
TATGTCGACC GGGCGATGAA CAATGCCGAC AGCTTTTCCG CTCCGTTTCA GGACGTTCTC
AACGAATATT GCTGGGGTGC GGCCTGGACC GACGAAGGGC TCGATCTCAA GCAGCGCAGC
CTTCTCAATC TCGGCATGCT GGCGGCACTC AACCGCATGC ATGAATTCGG GATCCACTTT
CGCGGCGCCA TTCGCAACGG GCTGACGGAC GACGAATTGC GGGCCGCACT CGTGCAGATC
GCGGTCTATT GCGGCATTCC CGCCGGCGTA GAAGCCTTCC GGGTTGCCCG CTCCATTCGC
GACGAGATGC GCCAGAAAGG AGAGGTCTGA
 
Protein sequence
MDETLRKSGE AVRRKVLGDD YVDRAMNNAD SFSAPFQDVL NEYCWGAAWT DEGLDLKQRS 
LLNLGMLAAL NRMHEFGIHF RGAIRNGLTD DELRAALVQI AVYCGIPAGV EAFRVARSIR
DEMRQKGEV