| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rleg2_5398 |
|---|
| Symbol | |
|---|
| ID | 6978492 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhizobium leguminosarum bv. trifolii WSM2304 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011368 |
|---|
| Strand | + |
|---|
| Start bp | 1039800 |
|---|
| End bp | 1041692 |
|---|
| Gene Length | 1893 bp |
|---|
| Protein Length | 630 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 643394500 |
|---|
| Product | 4-alpha-glucanotransferase |
|---|
| Protein accession | YP_002279318 |
|---|
| Protein GI | 209547400 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG1640] 4-alpha-glucanotransferase |
|---|
| TIGRFAM ID | [TIGR00217] 4-alpha-glucanotransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.229574 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.00287392 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGATGAAAT CCGCAGAGCT CGACAAACTC GCCCGCCGCC ACGGCATCAG CCTGACAAGG
CCTAGCCCCG AGAACCGGGA AGTGGTGATC TCAGCCGCGA CTAAGCGCAA AATACTCTCG
GCATTGAATA TTGAACTGAC GGAGGATCAA GAGCCTGGTG AGCCGCGGCG GAAGGCTAAG
CCGGATGGCA GGAAGATCCC GGTGTCGTTT CTGCCGGATT TCCTATCCGA CACACGGGTC
TGGGGCGTGA GCTTGCAGCT TTACGAGCTC CGTTCGGCAC GCAACTGGGG CATAGGAGAC
TTCCAGGATC TCGCCGATTT GGCCGATCTG GCGGGATCGC TGGGGGCGGA TTTCATCGGT
CTCAATCCGC TTCACGCGCC GTTCCTCGCC GATCCTGATC GCTGCAGCCC CTATGAACCC
TCAAGCCGCC AGCATCTCAA CCCGCTCTAT ATCGCGGTCG ACCAGGTGCC GGGCTTTGCT
GGCAATCCCA AGCTGGAACA GGAATTGGAG CGCCTTCGCC AATCCGATCT CGTCGACTAC
ATCGGTGTCG CGCGGGCCAA GCTTGGAGCC CTTCGTGATC TCTGGTCGGC GCGGCGACAA
TGCCGTGTTG GCGACGAGGC CGATTTCGAC GCATTTGTCG CGCAAGGCGG CGACAGCCTG
CGGCTGCATG CGCTGTTCGA ATGCCTCTCC GCTTTCATGG TCGAGCGCGG GGCGGGCGCC
GGCTGGCAGC GGTGGCCGGC CGAGTTGCAG CGCTTCGACA GCGCCGCTGT CGGCGATTTC
GAACGCGAGC ATGCAGATGA CGTTCGCTTT CACATGTGGC TGCAATGGCT CGCCCACCGC
CAGCTGATGC AGGCGGCAGA TCGGGCGCGC AAGGCCGGCC TCAGGATAGG GCTCTATCTC
GATCTTGCCG TCGGGGAGGC GGTCGACGGC TCGGCGACAT GGAGCGAGCC GGATATCTAT
GTCTCGCAGG CGACGATCGG TAGTCCTCCG GATCCATTCG CCGTCGATGG GCAGGATTGG
CACCTTGCCG GATACCTGCC ATCCGAAATT GCCGGAGGGG AGATGTCGCC TTACCGGCGC
ATGGTTGGCA CCGCCATGCG CTACGCGGGC GCCATTCGTA TTGATCACGC ACCGGCGATC
CGCCGCCTTT TCCTGGTTCC GTTAGGCAGC AGGCCGGATG GCGGCGCCTA CGTCCGCTAT
CCCGAGGACC GGCTGTTGCA GATCCTCGCC GAGGTTTCCG CTGAACATCG ATGCCTTGTC
ATCGGGGAGT CCCTCGGAAT GATTCCTGAA GGCTTGCAAG AGGATCTGGC TACTGCCGGC
ATTCTCTCCT ACCGGATCCT TTCCTATGAA CAGGATGAGA AGGGCTTCAA GCCCGCCGAT
GCCTATCCGG TCCTCGCGCT CGCCTGCATT TCGACGCATG ACCACCAGAC GCTTGCCGGC
TGGTGGCGCG GCGCCGACAT TCAGGATCGC TGTGAACACG GTATCGTGCC GCCCGATCTC
ACCGAAGAAC ATCTCAAATA CCGCAAGCGC GAGCGGAGGT ATCTGAAAGC GGTCTTCAAC
GCCGCTGGCC TCGACGTGCC GCCCCGGCTC ACGGCGGCGC GGGCAAGCCA GGAAGCGTTG
CAAGATCTGA CGGTGAGCGC TTATCGTTTC ATTGCTCGCA CGCCGTCGTT GCTGACATCG
GTGCGGCTTG CCGATCTCAC CGACGAGAAA GCGCCGACCA ATATTCCGGG CACCAGCGAC
AGCTATCCGA ACTGGAAGCC GAAGCTTTCG GTTTTGCTGG AGGATCTGCT GTCGGTCCTG
CTGCTCAAGC GCGTAACGGC GGCGATGCGG GAGGAAAGGC CGCGCTACGC CTCCGCGACG
CGAATGGAAA TCGATCGGGG ACGGAACGAA TAG
|
|---|
| Protein sequence | MMKSAELDKL ARRHGISLTR PSPENREVVI SAATKRKILS ALNIELTEDQ EPGEPRRKAK
PDGRKIPVSF LPDFLSDTRV WGVSLQLYEL RSARNWGIGD FQDLADLADL AGSLGADFIG
LNPLHAPFLA DPDRCSPYEP SSRQHLNPLY IAVDQVPGFA GNPKLEQELE RLRQSDLVDY
IGVARAKLGA LRDLWSARRQ CRVGDEADFD AFVAQGGDSL RLHALFECLS AFMVERGAGA
GWQRWPAELQ RFDSAAVGDF EREHADDVRF HMWLQWLAHR QLMQAADRAR KAGLRIGLYL
DLAVGEAVDG SATWSEPDIY VSQATIGSPP DPFAVDGQDW HLAGYLPSEI AGGEMSPYRR
MVGTAMRYAG AIRIDHAPAI RRLFLVPLGS RPDGGAYVRY PEDRLLQILA EVSAEHRCLV
IGESLGMIPE GLQEDLATAG ILSYRILSYE QDEKGFKPAD AYPVLALACI STHDHQTLAG
WWRGADIQDR CEHGIVPPDL TEEHLKYRKR ERRYLKAVFN AAGLDVPPRL TAARASQEAL
QDLTVSAYRF IARTPSLLTS VRLADLTDEK APTNIPGTSD SYPNWKPKLS VLLEDLLSVL
LLKRVTAAMR EERPRYASAT RMEIDRGRNE
|
|---|
| |