Gene Rleg2_5356 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg2_5356 
Symbol 
ID6978450 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM2304 
KingdomBacteria 
Replicon accessionNC_011368 
Strand
Start bp982697 
End bp983983 
Gene Length1287 bp 
Protein Length428 aa 
Translation table11 
GC content60% 
IMG OID643394458 
Productextracellular solute-binding protein family 1 
Protein accessionYP_002279276 
Protein GI209547358 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1653] ABC-type sugar transport system, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.0798754 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.176605 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAACGT ATCTTTCAGG GGCTTTCGCA CTGGCGCTTG CCACCGTTTC TTTCGCATGG 
TCCAGCGTGG CAATGGCGGA AACCCAGACG ATCACCTTTC TCTTCACCGA CGACGACCAG
GCTTATGTCG AGCGGATGGA AGCGCTGAGC AAGGAATTCG AGACGGCGCA TCCCGACATC
AAGGTGAATT TCGTCTCGTC GGGTTATGAT GCCGTCGCCA AGCAGCTGCC GGTGCAGCTT
GCCATCGGCG AAGGTCCTGA TGTCGCCAAG ATCACCGACT GGCAGCTGGC GCCCTATTAC
CTCGACATGC GGCCGCTGAT GAAGGATCCG GATGGCTTCG CCAAGCTGCA CGGCGACAGC
CTGAACACGC TTCGCTTCCC CGGCGTCAAC GATGCGAACT CGATCAACGG CTACGTCGCG
TCGCAGACCT TCAACCTGCC CTTCGTCAAC AAGACGCTGT TCGAACAGGC GAAAGAGCCG
CTTCCGCAGC CCACCGCCAC GCTGAAGGAC ATCGTCGAAG CCTCGGCCCG CGTCGCCAAG
GCGACCGGCG CTCAGATCCC CTTCACGATG GACCGCTCGG GCCACCGCTT CTCGGGTGCT
GCCTTCTCCT ACGGCTCGAA CTACGTCAAG GACGGCAAGT TCGCCTTCCC CGACGATGCC
GCCAAGCACT ACATCACCGA TCTCTACAAC TGGACGAAGG ACGGCTCTTT CCCGAAGGAA
ATGTGGGGCG CTGCCGGCGG AACTCAGTAC AAGAACATGG GTGACGAGTT CGTCAACGGC
AATGTCGTGA CCTATCTCGC CGGCAACTGG ATGGTCAATC CGTTCCAGAA GAAGATCGGC
GACGCGTTCG ACTGGACGGC GATCAGCGCG CCCTGCGGCG ATGCCGGTTG CTATGCGATG
CCGGGTGGTA CCGCAATCGT CGGCTTCAAG CGCACCAAGT ACCCGCAGGC CGTCGCCTCC
TTCATCGAGT TCCTCGGCTC TGAAAAGGTC CAGCGTGAAA TCGCCGAAAA CTACGTCATC
CTGACCGGCG CCGACATCAA GGATCCGCAG TACAAGCTCG ACAGCAAGAA CGCCAAGGAC
GCCATGGCCG TCTTCCTCGC AAGCCGCAAC AGCGCGCCGA AGGCAGCCCG CGATCTCGAA
CGCCTGAAGG GCTCCTCCGC CATCTATCAG CTCATCGTCC AGCGGATGAG CCAACTGATC
GTCGGCGAAC TTTCCCTTGA GGACACCTTC AAGGCGATGA GCGCAGACGT CGACAAGGTC
AACGTGGCGC TTGCCGCCAA CAAGTAA
 
Protein sequence
MKTYLSGAFA LALATVSFAW SSVAMAETQT ITFLFTDDDQ AYVERMEALS KEFETAHPDI 
KVNFVSSGYD AVAKQLPVQL AIGEGPDVAK ITDWQLAPYY LDMRPLMKDP DGFAKLHGDS
LNTLRFPGVN DANSINGYVA SQTFNLPFVN KTLFEQAKEP LPQPTATLKD IVEASARVAK
ATGAQIPFTM DRSGHRFSGA AFSYGSNYVK DGKFAFPDDA AKHYITDLYN WTKDGSFPKE
MWGAAGGTQY KNMGDEFVNG NVVTYLAGNW MVNPFQKKIG DAFDWTAISA PCGDAGCYAM
PGGTAIVGFK RTKYPQAVAS FIEFLGSEKV QREIAENYVI LTGADIKDPQ YKLDSKNAKD
AMAVFLASRN SAPKAARDLE RLKGSSAIYQ LIVQRMSQLI VGELSLEDTF KAMSADVDKV
NVALAANK