Gene Rleg2_4994 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg2_4994 
Symbol 
ID6978088 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM2304 
KingdomBacteria 
Replicon accessionNC_011368 
Strand
Start bp639002 
End bp639874 
Gene Length873 bp 
Protein Length290 aa 
Translation table11 
GC content60% 
IMG OID643394140 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_002278958 
Protein GI209547040 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1176] ABC-type spermidine/putrescine transport system, permease component I 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACAGT CGACACGCAG TCCCTCGGAG CTGCATGAAC GGAGCGAGCA GCGTCTGATG 
CTGCTACTTT TAGCTCCTGC CCTGCTGGTG ATCGTCGTGT TGCTGGTCCT GCCGCTTTTG
TGGCTTGGCT GGCAGTCGAT CCGGCAGGAT GGCGGCTTCA CGCTCGTCCA CTACCAGCGC
TTTCTGACGG ATTCGGTCTA CTGGATGACC TTCCTGCAAA CCTTTCGCAT CGCGGCGATC
GTCACGTTTA TGACGGTCGT CCTCGGTTAT CCCGTCGCCT ATGTGGCGGC GGGCCTGCCG
CAGCGCTGGA GCATTCTCGT TCTGGCGATG GTGCTGCTGC CGTTCTGGAC CTCGGTTCTG
GTCCGCGCCT ATGCGTGGCT GATCCTGTTG CAGCGCAACG GCATCATCAA TTCGGTCCTG
ACAGGCTCTG GCCTGATCGA CGCGCCGCTG AAACTGGTCA ACAACGAGTT CGGTACTGTC
ATGGCGACAA TCCACATCCT GCTGCCCTTC ATGGTACTGC CGCTCTATGC GACGATGAAG
AAAATCCCGG GCGAACTCAC TATGGCTGGC GCCAGCCTGG GCGGATCGCC GCTGCACGTG
TTTCTGCGCG TCTTCCTGCC CTTGTCGCTG CCGGGCATGA TCGCCGGCAT GGTGCTGGTG
TTCGTGCTGA CCCTCGGCTT CTACATCACG CCGGAACTGC TCGGCGGCGG CCGCACCTAC
ATGGTCTCCA TGCTGGTCTC GCGCAATATC GAAGTCTACA ACGAATGGGG CGCCGCCTCC
TCGATTAGCG TGGTGCTGAT GGTCTGCGTC TTTCTCGTCT TCCGACTTGC GAGCCTGCTC
ATTCCCTTCG AACGCATCAT GGGAACGAGG TGA
 
Protein sequence
MKQSTRSPSE LHERSEQRLM LLLLAPALLV IVVLLVLPLL WLGWQSIRQD GGFTLVHYQR 
FLTDSVYWMT FLQTFRIAAI VTFMTVVLGY PVAYVAAGLP QRWSILVLAM VLLPFWTSVL
VRAYAWLILL QRNGIINSVL TGSGLIDAPL KLVNNEFGTV MATIHILLPF MVLPLYATMK
KIPGELTMAG ASLGGSPLHV FLRVFLPLSL PGMIAGMVLV FVLTLGFYIT PELLGGGRTY
MVSMLVSRNI EVYNEWGAAS SISVVLMVCV FLVFRLASLL IPFERIMGTR