Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rleg2_4839 |
Symbol | |
ID | 6977933 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhizobium leguminosarum bv. trifolii WSM2304 |
Kingdom | Bacteria |
Replicon accession | NC_011368 |
Strand | + |
Start bp | 482229 |
End bp | 482891 |
Gene Length | 663 bp |
Protein Length | 220 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 643394000 |
Product | polar amino acid ABC transporter, inner membrane subunit |
Protein accession | YP_002278818 |
Protein GI | 209546900 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0765] ABC-type amino acid transport system, permease component |
TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 0.312252 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.0115457 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATTATA CGTTCGATTT CAATGCCGTC TCCATCGCGC CGCTTCTGCA GGGGCTCTGG GTTTCGCTGC AGCTGACGGC GGCTGTGAAC GTCCTCGGCG TCGTTCTGGG CTTCGGACTG GCCCTCCTGA TCATGAGCCC GATCAAGGTC GTACGGCTGC CATTCATGCT GTTCGTCGAA TTCTTCCGCT GCACGCCGGC CATCGTCCAG ATCGTCTGGA TCTTCTACTG CGTGCCGATG CTGTTCGACG TCTTTCTCGA TCCGATGACA ATGGGCATCA TGGCGCTCGG GCTCAATCTG ATGGCGTTCA ACGCCGAAGC CTACCGCGCA TCCATCCAGG CGGTTCCCCG CGAGCAGCTC GACGCCGGCA TTGCGCTCGG TCTCAATCCG CTGCAGCGGG TGCTCTATAT CGTCTTTCCG ACGGCGTTCC GCGCCTCGAT CCCGGTGCTT TTGACCAATG GTATCGTCAT CTTCCAACAG AGCGCGCTGG TCGCGATCGT GGCGATCCAG GACCTGATGT ACCAGGGCAA GACGCTGGCG ACCGAGACCT ACCGGCCGAT CGAGACCTTC ACCGTCGTGG CGCTCATCTA TTTCGCCGTG TCCTTCCCGA TAACCCAGAT CGTCGGCCTG CTCGAACGCC GCCGCCAGAT CCTCGTCAGC TAG
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Protein sequence | MNYTFDFNAV SIAPLLQGLW VSLQLTAAVN VLGVVLGFGL ALLIMSPIKV VRLPFMLFVE FFRCTPAIVQ IVWIFYCVPM LFDVFLDPMT MGIMALGLNL MAFNAEAYRA SIQAVPREQL DAGIALGLNP LQRVLYIVFP TAFRASIPVL LTNGIVIFQQ SALVAIVAIQ DLMYQGKTLA TETYRPIETF TVVALIYFAV SFPITQIVGL LERRRQILVS
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