Gene Rleg2_4839 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg2_4839 
Symbol 
ID6977933 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM2304 
KingdomBacteria 
Replicon accessionNC_011368 
Strand
Start bp482229 
End bp482891 
Gene Length663 bp 
Protein Length220 aa 
Translation table11 
GC content61% 
IMG OID643394000 
Productpolar amino acid ABC transporter, inner membrane subunit 
Protein accessionYP_002278818 
Protein GI209546900 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0765] ABC-type amino acid transport system, permease component 
TIGRFAM ID[TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.312252 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.0115457 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATTATA CGTTCGATTT CAATGCCGTC TCCATCGCGC CGCTTCTGCA GGGGCTCTGG 
GTTTCGCTGC AGCTGACGGC GGCTGTGAAC GTCCTCGGCG TCGTTCTGGG CTTCGGACTG
GCCCTCCTGA TCATGAGCCC GATCAAGGTC GTACGGCTGC CATTCATGCT GTTCGTCGAA
TTCTTCCGCT GCACGCCGGC CATCGTCCAG ATCGTCTGGA TCTTCTACTG CGTGCCGATG
CTGTTCGACG TCTTTCTCGA TCCGATGACA ATGGGCATCA TGGCGCTCGG GCTCAATCTG
ATGGCGTTCA ACGCCGAAGC CTACCGCGCA TCCATCCAGG CGGTTCCCCG CGAGCAGCTC
GACGCCGGCA TTGCGCTCGG TCTCAATCCG CTGCAGCGGG TGCTCTATAT CGTCTTTCCG
ACGGCGTTCC GCGCCTCGAT CCCGGTGCTT TTGACCAATG GTATCGTCAT CTTCCAACAG
AGCGCGCTGG TCGCGATCGT GGCGATCCAG GACCTGATGT ACCAGGGCAA GACGCTGGCG
ACCGAGACCT ACCGGCCGAT CGAGACCTTC ACCGTCGTGG CGCTCATCTA TTTCGCCGTG
TCCTTCCCGA TAACCCAGAT CGTCGGCCTG CTCGAACGCC GCCGCCAGAT CCTCGTCAGC
TAG
 
Protein sequence
MNYTFDFNAV SIAPLLQGLW VSLQLTAAVN VLGVVLGFGL ALLIMSPIKV VRLPFMLFVE 
FFRCTPAIVQ IVWIFYCVPM LFDVFLDPMT MGIMALGLNL MAFNAEAYRA SIQAVPREQL
DAGIALGLNP LQRVLYIVFP TAFRASIPVL LTNGIVIFQQ SALVAIVAIQ DLMYQGKTLA
TETYRPIETF TVVALIYFAV SFPITQIVGL LERRRQILVS