| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rleg2_4406 |
|---|
| Symbol | |
|---|
| ID | 6977500 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhizobium leguminosarum bv. trifolii WSM2304 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011368 |
|---|
| Strand | + |
|---|
| Start bp | 36181 |
|---|
| End bp | 36717 |
|---|
| Gene Length | 537 bp |
|---|
| Protein Length | 178 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 643393586 |
|---|
| Product | peptidase A24A prepilin type IV |
|---|
| Protein accession | YP_002278404 |
|---|
| Protein GI | 209546486 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG4960] Flp pilus assembly protein, protease CpaA |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 38 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTGAAAC TGGTCGTCGT TATTAATTAT CTTTCAGTAT TACTTTTTCT CTACGCCGCC
TGGACAGATT TCCGTACATG GAAGATCCCC AACACGGTCG TTCTTGCCCT CGTAACACTC
TATGTATTGC GCGCGGTGGC TGTGATTCTC AGCTCCGAAG ATGTCGGCGC TGCGCTGTTT
GCTTCGAGCG GAATTGGCGG TGACGTCGGG GCCGGTCTGC TGATGTTTAT GCTTGGGGTG
GTGCTCTGGG CACTCCGGCT GTTCGGCGCA GGGGACGCCA AGCTTTTCCT GCCGATCGGC
CTTTTTGTCG GATGGCATAG TATGCTGCCG TTTTCGTTTT TCCTTCTCGT CCTCGGCATC
GTGACGCTCC TGGCCCTGCG GCTGCCGGTG CCGTTGCCCG TCGCACATCT CGCTTTTTTC
ATGCGCATCG CGGAAATCCG GGCGAGCCGG AAGGTGCCTT ATGGCGTCGT CATGGTTTTC
GCGGTGCTCC TCACCCTGGC TTTGCCCATG ATCCGACAGC AGCTGCAGCT ACCGTGA
|
|---|
| Protein sequence | MLKLVVVINY LSVLLFLYAA WTDFRTWKIP NTVVLALVTL YVLRAVAVIL SSEDVGAALF
ASSGIGGDVG AGLLMFMLGV VLWALRLFGA GDAKLFLPIG LFVGWHSMLP FSFFLLVLGI
VTLLALRLPV PLPVAHLAFF MRIAEIRASR KVPYGVVMVF AVLLTLALPM IRQQLQLP
|
|---|
| |