Gene Rleg2_4006 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg2_4006 
Symbol 
ID6982776 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM2304 
KingdomBacteria 
Replicon accessionNC_011369 
Strand
Start bp4174052 
End bp4175338 
Gene Length1287 bp 
Protein Length428 aa 
Translation table11 
GC content62% 
IMG OID643398735 
Productextracellular solute-binding protein family 1 
Protein accessionYP_002283494 
Protein GI209551577 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1653] ABC-type sugar transport system, periplasmic component 
TIGRFAM ID[TIGR01409] Tat (twin-arginine translocation) pathway signal sequence 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGGTCA ACCGCCGTTC ATTTCTGATG GGATCAGCCG GAGCAGCCGC CGGCCTCGCC 
TTTGGCGCGG GAAGCGCCAT TCCGGCTTTT GCCGAGGACA CCTCGCTGCG CGCCATGTGG
TGGGGTTCGA ACGACCGCGC CAAGCGCACG CTCGATGTCG CCAAGCTCTA TCAATCGAAG
ACACCCGGCG TCACGATCGT CGGTGAATCG CTATCCGGCG ACGGCTACTG GACCAAGCTC
GCAACGCAGA TGGCCGGGCG CTCGATCGCC GACATCTTCC AGCTCGAGCC GGGAACGATC
TCCGATTATT CCAAGCGCGG CGCCTGCCTG CCGCTCGACG AATTCGTCCC CTCGACGCTG
AAGGTCCAGT CCTTCGGCGC CGACATGCTG AAACTGACCA CCATCGACGG CAAACTCTAT
GGTGTCGGCC TCGGCCTCAA CTCCTTCTCG ATGTTTTTCG ACACGGTCGA ATTCGAAAAG
GCCGGCATCC CGCTGCCGAC ACCCGACCTT ACCTGGGATG AGTATGCCAA GCTCGCTGTC
GAACTCACAA AGTCTTCCGG CAAGAGCGGA GGCCCCTATG CGGCCCGCTA CGCCTATGTG
TTCGACGCCT GGCTGCGCCA GCGCGGCAAG AGCCTTTTTG CAAAGGAAAC CGTCGGGCTC
GGCTTCACGG CCGACGATGC CACGGAATGG TTCGACTATT GGGAGAAGCT GCGCAAGGCG
GGCGGCACCG TTGCCGCCGA TGTGCAGACG CTCGATCAGA ACACCATCGA CACCAATAGC
CTCGGTGTCG GTAAATCGGT GATGGGCATG GCCTATTCCA ACCAGATGGT CGGCTACCAG
CTGATCATCA AGAACAAGCT CGGCGTCACC ATGCTGCCGC GGGAAAAGAA GGGCGGACCC
TCCGGCCACT ACTACCGTCC TGCGCTGATC TGGAGTCTCG GCGCCACGAC GAAGAACGGT
GAAGCGGCCG CGAAATTCAT CGACTTCTTC GTCAACGATA TCGAGGCCGG CAAGATCCTC
GGCGTCGAGC GCGGCGTGCC GATGTCGCCG ACCGTGCGTG AAGCCATTCT GCCGCAACTC
AACCCGACGG AGCAGGAAAC GGTCAAATAC GTCAATCTTC TGAAAGATCA GGTCGGCGAA
TATCCGCCGC CGGTGCCGAT GGGCGCAACC CAGTTCGACC AGCGCGTGCT GCGCCCGATC
TGCGACGAAC TCGCTTTCGA ACGGATTTCG CCGGCCGATG CGGCGACCCG GCTCGTCGAA
GAGGGGAAGG CGACGCTCAA AGGATGA
 
Protein sequence
MQVNRRSFLM GSAGAAAGLA FGAGSAIPAF AEDTSLRAMW WGSNDRAKRT LDVAKLYQSK 
TPGVTIVGES LSGDGYWTKL ATQMAGRSIA DIFQLEPGTI SDYSKRGACL PLDEFVPSTL
KVQSFGADML KLTTIDGKLY GVGLGLNSFS MFFDTVEFEK AGIPLPTPDL TWDEYAKLAV
ELTKSSGKSG GPYAARYAYV FDAWLRQRGK SLFAKETVGL GFTADDATEW FDYWEKLRKA
GGTVAADVQT LDQNTIDTNS LGVGKSVMGM AYSNQMVGYQ LIIKNKLGVT MLPREKKGGP
SGHYYRPALI WSLGATTKNG EAAAKFIDFF VNDIEAGKIL GVERGVPMSP TVREAILPQL
NPTEQETVKY VNLLKDQVGE YPPPVPMGAT QFDQRVLRPI CDELAFERIS PADAATRLVE
EGKATLKG