Gene Rleg2_3923 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg2_3923 
Symbol 
ID6982687 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM2304 
KingdomBacteria 
Replicon accessionNC_011369 
Strand
Start bp4071987 
End bp4072646 
Gene Length660 bp 
Protein Length219 aa 
Translation table11 
GC content65% 
IMG OID643398646 
Productalanine racemase domain protein 
Protein accessionYP_002283411 
Protein GI209551494 
COG category[R] General function prediction only 
COG ID[COG0325] Predicted enzyme with a TIM-barrel fold 
TIGRFAM ID[TIGR00044] pyridoxal phosphate enzyme, YggS family 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value0.823584 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.338994 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAACTTC AAGAGCGCTT GAACGACGTG CGGTCGCGGA TTGCGGCTGG TGAACGCCAG 
GCAGCCCGCC CTGCGGGTTC CGTTGAGCTC GTCGCGGTGT CGAAGACCTT CGAGGCGGAG
GCGATCCGCC CGGCCATCGA CGCCGGGCAG CGCGTCTTCG GCGAGAACCG GGTGCAGGAG
AGCCAGGGTA AGTGGCCGGC GCTGAAGGCC GAGCGGCCGG ATATCGTGCT GCACCTGATC
GGACCGCTGC AATCGAACAA GGCGGCGGAT GCGGTGGCGC TTTTCGACGT CATCGAGACG
GTGGATCGGG AAAAGATCGC CCGCGCGCTT GCCGAGGAGA TGAAGCGGCA GGACAAGAGG
CCGCGGCTCT ACGTCCAGGT CAATACCGGG CTCGAGCCGC AGAAAGCCGG CATCGCGCCT
GACGATACGC CGGCCTTCGT CAGCCTTTGC CGCGACGAAC TCGGTCTTTC CATCGAAGGT
CTGATGTGCA TTCCGCCTGC CGAGGAAAAC CCCGGGCCGC ATTTCGCCCT GCTGGCAAAG
CTCGCGCTCA AATGCGGCGT TGAAAAACTG TCGATGGGCA TGTCGGGGGA CTACGAGACG
GCGATCGCCT TCGGCGCCAC CAGCGTGCGC GTGGGATCGG CGATTTTCGG CGCTCGCTGA
 
Protein sequence
MELQERLNDV RSRIAAGERQ AARPAGSVEL VAVSKTFEAE AIRPAIDAGQ RVFGENRVQE 
SQGKWPALKA ERPDIVLHLI GPLQSNKAAD AVALFDVIET VDREKIARAL AEEMKRQDKR
PRLYVQVNTG LEPQKAGIAP DDTPAFVSLC RDELGLSIEG LMCIPPAEEN PGPHFALLAK
LALKCGVEKL SMGMSGDYET AIAFGATSVR VGSAIFGAR