Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rleg2_3923 |
Symbol | |
ID | 6982687 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhizobium leguminosarum bv. trifolii WSM2304 |
Kingdom | Bacteria |
Replicon accession | NC_011369 |
Strand | - |
Start bp | 4071987 |
End bp | 4072646 |
Gene Length | 660 bp |
Protein Length | 219 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 643398646 |
Product | alanine racemase domain protein |
Protein accession | YP_002283411 |
Protein GI | 209551494 |
COG category | [R] General function prediction only |
COG ID | [COG0325] Predicted enzyme with a TIM-barrel fold |
TIGRFAM ID | [TIGR00044] pyridoxal phosphate enzyme, YggS family |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 0.823584 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.338994 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAACTTC AAGAGCGCTT GAACGACGTG CGGTCGCGGA TTGCGGCTGG TGAACGCCAG GCAGCCCGCC CTGCGGGTTC CGTTGAGCTC GTCGCGGTGT CGAAGACCTT CGAGGCGGAG GCGATCCGCC CGGCCATCGA CGCCGGGCAG CGCGTCTTCG GCGAGAACCG GGTGCAGGAG AGCCAGGGTA AGTGGCCGGC GCTGAAGGCC GAGCGGCCGG ATATCGTGCT GCACCTGATC GGACCGCTGC AATCGAACAA GGCGGCGGAT GCGGTGGCGC TTTTCGACGT CATCGAGACG GTGGATCGGG AAAAGATCGC CCGCGCGCTT GCCGAGGAGA TGAAGCGGCA GGACAAGAGG CCGCGGCTCT ACGTCCAGGT CAATACCGGG CTCGAGCCGC AGAAAGCCGG CATCGCGCCT GACGATACGC CGGCCTTCGT CAGCCTTTGC CGCGACGAAC TCGGTCTTTC CATCGAAGGT CTGATGTGCA TTCCGCCTGC CGAGGAAAAC CCCGGGCCGC ATTTCGCCCT GCTGGCAAAG CTCGCGCTCA AATGCGGCGT TGAAAAACTG TCGATGGGCA TGTCGGGGGA CTACGAGACG GCGATCGCCT TCGGCGCCAC CAGCGTGCGC GTGGGATCGG CGATTTTCGG CGCTCGCTGA
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Protein sequence | MELQERLNDV RSRIAAGERQ AARPAGSVEL VAVSKTFEAE AIRPAIDAGQ RVFGENRVQE SQGKWPALKA ERPDIVLHLI GPLQSNKAAD AVALFDVIET VDREKIARAL AEEMKRQDKR PRLYVQVNTG LEPQKAGIAP DDTPAFVSLC RDELGLSIEG LMCIPPAEEN PGPHFALLAK LALKCGVEKL SMGMSGDYET AIAFGATSVR VGSAIFGAR
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