Gene Rleg2_3425 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg2_3425 
Symbol 
ID6982179 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM2304 
KingdomBacteria 
Replicon accessionNC_011369 
Strand
Start bp3542451 
End bp3543413 
Gene Length963 bp 
Protein Length320 aa 
Translation table11 
GC content60% 
IMG OID643398143 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_002282918 
Protein GI209551001 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1176] ABC-type spermidine/putrescine transport system, permease component I 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGGCAC TCACCATCTC CAACGCCAAG ACATCGATCC TTCCCGGACG CAGCGGTTTC 
TTCGGCCGGA TGTCGGATGC CTTCTGGCGG CACCCGAAGC TCTTACTCTT CCTGATGCTG
ACGCCGCCGC TGCTTTGGCT CGGCATCATC TATATCGGTT CGCTGATCGC CCTGCTGCTG
CAGAGCTTCT TCTCCATCGA CGATTTTTCC GGCCTGGTGA ATTACGAATT CACCCTTGCG
ACCTATGCCC AGCTTCTGAG CCCGACGAAT TTCGACATCA TCATCCGCAC AGTCGTGATG
GCGGCGCTGG TCACCATCGC TTCCGCATTG ATCGCCTTCC CGATCGCCTA CTACGCGGCG
CGTTATGCCC AAGGCAAATG GAAGGTGCTC TTTTATCTCG GCGTCATGCT GCCGCTCTGG
TCGAGCTATC TCGTCAAGAT CTACGCCTGG AAACTGATCC TCGCCAAGGA AGGCATCCTC
ACCTGGATCT TCGAGAGGCT GCATCTCTCC TGGCTGCTCG ACGGCATCCT CAATCTGCCG
GTCGTCGGCG GCAATTCGCT CTCGGTGAGC TACCTCGGCA CCTTCATCGT CTTCGTCTAC
ATCTGGCTTC CCTATATGAT CCTGCCGACG CAGGCGGCCC TCGAACGCGT GCCAGGCAAC
TTGATCGAGG CCTCGGCCGA TCTCGGCGCC ACGCCGCGCC AGACCTTCCG CACCGTGCTG
CTGCCCTTGG CGCTCCCCGG CATCGTCGCC GGTTCGATCT TCACCTTCTC GCTGACATTG
GGCGATTACA TCATCCCGCA GATCATCGGC TCGTCCAGGC TCTTCATCGG CCAGGCCGTC
TATGCCCAGC AGGGAACGGC CGGAAACGTG CCGCTCGCCG CCGCCTTCTC CGTCGTGCCG
ATCGTCATCA TGGCGCTTTA CCTGTCACTT GCCAAAAAAC TGGGAGCCTT CGATGCGCTC
TGA
 
Protein sequence
MTALTISNAK TSILPGRSGF FGRMSDAFWR HPKLLLFLML TPPLLWLGII YIGSLIALLL 
QSFFSIDDFS GLVNYEFTLA TYAQLLSPTN FDIIIRTVVM AALVTIASAL IAFPIAYYAA
RYAQGKWKVL FYLGVMLPLW SSYLVKIYAW KLILAKEGIL TWIFERLHLS WLLDGILNLP
VVGGNSLSVS YLGTFIVFVY IWLPYMILPT QAALERVPGN LIEASADLGA TPRQTFRTVL
LPLALPGIVA GSIFTFSLTL GDYIIPQIIG SSRLFIGQAV YAQQGTAGNV PLAAAFSVVP
IVIMALYLSL AKKLGAFDAL