| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rleg2_3108 |
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| Symbol | |
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| ID | 6981853 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhizobium leguminosarum bv. trifolii WSM2304 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011369 |
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| Strand | + |
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| Start bp | 3175613 |
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| End bp | 3178798 |
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| Gene Length | 3186 bp |
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| Protein Length | 1061 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 643397818 |
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| Product | transporter, hydrophobe/amphiphile efflux-1 (HAE1) family |
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| Protein accession | YP_002282601 |
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| Protein GI | 209550684 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0841] Cation/multidrug efflux pump |
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| TIGRFAM ID | [TIGR00915] The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.511682 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGATTCG CGCACTTCTT CGTTGACCGG CCGATCTTTG CGGCCGTCAT CTCGATCCTC
TTTCTCGTCG TCGGCGGCAT CGCCTACACA CAGTTGCCGG TCTCCCAATA TCCGGAGATC
GCGCCGCCGA CCATCGTCGT GCGCACCTCC TATCCCGGCG CCGACCCGCA GACGATAGCC
GATACCGTTT CGACGCCGCT CGAACAGCAG ATCAACGGCG TCGAAGACAT GCTCTACATG
TCGTCCTATT CCAGCGCCGA CGGCGCCATG TCGCTGACGA TCACCTTCAA GCTCGGCACC
GATCTCGACA AGGTGCAGGT GCTTGTCCAG AACCGTGTTT CGATCGCGCT GCCCCGCCTT
CCGGAAGAGG TCCAGCGGCT CGGCGTGACC ACAGACAAGA GTTCGCCCGA CCTGATGATG
GTGGTGCACC TGCTGTCGCC GTCGCACCGC TATGACCAGC TTTACGTCTC GAACTACGCC
CGCAACCGCA TCCGCGACGT TCTCGTCCGC CTTGACGGCG TCGGCGATGT GCAAATCTTC
GGCGAGCGCC AATATTCGAT GCGCATCTGG CTCGATCCGG AAAAGCTCTC GGCCTACGGC
ATGACCTCGG ACGACGTCGT CTCCGCCTTG CGGGACCAGA ACGTCCAGGT CTCCGGCGGC
AAGATCGGCG CGCCGCCGGT CACCGGCAAG AACGCCTTCG AATATACGGT GCGAACGGAC
GGACGCTTCT CCGACGTGCG CGAGTTCCGC TACGTCATCG TCAAATCGAC GGGCGCCGGC
CGGCTCGTGC AGTTGCAGGA TGTCGCCCGT ATCGAACTCG GCGCCCAGGA CTACGTCACC
AACAGCTACC TCAACAACGA CCCGGCGGTC GCCCTTGGCA TTTTCGCCCG GCCGGGAACC
AATGCACTGG ATACGGCCCA TCAGGTCCAG ACATTGATGA AGGATATCTC CCAGAATTTC
CCCGAGGGCC TGGAATATCG CATCGTCTAC GACACGACCG AATTCATCTC GGATTCGATC
AGCGAGGTCT ATAGAACCAT CGCCGAGGCC GCCATCCTGG TGGCGATCGT CGTTCTCGTC
TTTCTGCAAT CCTGGCGAAC CGCGATCATA CCGATCGTCG CCATTCCGGT CTCGCTGATC
GGCACCTTCG CCATCCTGCT GGCGTTCGGC TTCTCGCTCA ACATGCTCAC TCTGTTCGGC
CTGGTGCTGG CGATCGGTAT CGTCGTCGAC GATGCGATCG TGGTGGTGGA AAACGTCGAG
CGCAATCTGG CCCGCGGCAT GACGCCGAAG CAAGCTTCCC ATGTGACGAT GGACGAAGTC
GGAACCGCAG TCGTCGCCAT CTCGCTGGTG CTGATCGCCG TGTTCGTGCC GACAGCCTTC
ATCCCCGGCA TATCGGGCCA GTTCTACAGG CAGTTCGCCG TGACGATCTC GGTCACCACC
GCGATATCGG CTTTGAATTC GCTGACACTG TCGCCCGCCC TCGCCGGCAT ATTGCTGAAA
ACCCACGACC ACGAAACCAG GCGCGCGAAT ATCGCCACAC GGTTTGGAAG AGGTCTCGCG
GACGGTTTCA ATCGCGGCTT CGACAGAATG AGCTCCGGCT ATTCATGGAC CGTTCGGCAT
CTGGTCAGCA GCTGGGTCGG ATTGACAGCC GCGATGATCG CCTTCGTCTG CCTGCTCGGA
GCAACCTGGT ACATGAGCAC GCGCGTCCCC GCGGGCTTCA TCCCGACCAT GGACCAGGGC
TACGCAATCG TCGTCATACA GCTTCCCGAC GGCGCCTCGC TGGCGCGTAC CGACGCCGTC
GTCAAACAGG TGGGCGATAT CGCCCGGACC GTGCCGGGTG TCGGCAACGC CGTGCAATTT
GCCGGCTTCA GCGGGGCGAC GTTCACCAAT GCCTCGAATG CGGGCGTCGT CTTCGTGCCG
TTCAAATCCT TTGCCGAACG TGAGGAAGGC GGAGAGAACG CCAACAAGAT CATCGGCGAG
CTTTACGGCA AATTGCAAAG CATCCAGGAA GCCTTCATCA TCGCCATCCC GCCGCCATCC
GTGCGTGGCG TCGGCAATTC CGGCGGCTTC AAGATGCAGA TTTCAGATCT TGAAAACGCC
GACATGACGC GCGTGCTCGG CCTCGCCCGG CAGATGATGG GTGCGGCGGC CACCACCGAG
GGGCTGACCG GGGTGTTTAC GACATTCTCC GATGCAAGCC CGCAATATTT CCTGGCGATC
GACCGCGACA AGGCGCGCTT CCTGAATGTG CCGATCCCCA ATATCTTCAA CGCGCTTTCC
ATCAATCTGG GCGTCGCTTA CGTCAATGAC TTCAATGCGT TCGGCCGCGT CTACCAGGTT
CGCGCGCAGG CCGACCGGCA ATATCGTATG GATAGGGAAG ACATCCTCGC CCTGAAGGTT
CGATCGGCGA CCGGCGCGCT GGTTCCGCTT GGAACCTTGA TGGATATCCA GGATGCCAGC
GGCCCGGCAC TTGTCCAACG CTACAATATG TACGTCTCGG TGCCGCTTCA GGGCAATCCG
ACACCGGGCA CGTCGACGGG CGATGCTATA GCGAAAATGG AAGCGCTGGC AGCGAAGATC
CTGCCGCAAG GGACAACCTT CGAATGGACG GAACTCGCCT ATCAGGAAAC CCATACCGGC
AACACCGCCG TCTACATCTT CGCCCTCTCA GTCGTCTTCG TCTTCCTGGC GCTGGCGGCA
CAATATGAAA GCTGGGTTCT GCCGCTCGCC ATCATCCTCA TCGTGCCGCT TGCGGTGCTC
GCGGCACTGA TCGGGGTCTC GCTGAGGGGA ATGGACAATA ACGTCCTGAC GCAGATCGGC
CTGATCGTGC TGATCGGTCT TGCGGCCAAG AACGCCATTC TGATCGTCGA GTTTGCCAGG
CAGGCGGAAG ACGAGGGCAA GTCGCCGGTG GAAGCGGCCA TCGAGGCCAG CCATCTTCGT
CTGCGCCCGA TCCTGATGAC GGCATTCGCC TTCATCTTCG GCGTTCTGCC GCTTGCCATC
GCCACCGGCC CCGGCGCCGA AATGCGTCAG TCGCTCGGCA CCGCCGTCTT CTCGGGCATG
CTTGGCGTGA CGATCTTCGG CCTGTTCCTG ACGCCGGTCT TCTACGTCGT GCTGCGCGGC
TGGCGCCGCA AGCAGCCGGC GGAAAAGACG GTGGAGGCCG TCCCGGTTGA AAGCGAAACG
GTCTGA
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| Protein sequence | MRFAHFFVDR PIFAAVISIL FLVVGGIAYT QLPVSQYPEI APPTIVVRTS YPGADPQTIA
DTVSTPLEQQ INGVEDMLYM SSYSSADGAM SLTITFKLGT DLDKVQVLVQ NRVSIALPRL
PEEVQRLGVT TDKSSPDLMM VVHLLSPSHR YDQLYVSNYA RNRIRDVLVR LDGVGDVQIF
GERQYSMRIW LDPEKLSAYG MTSDDVVSAL RDQNVQVSGG KIGAPPVTGK NAFEYTVRTD
GRFSDVREFR YVIVKSTGAG RLVQLQDVAR IELGAQDYVT NSYLNNDPAV ALGIFARPGT
NALDTAHQVQ TLMKDISQNF PEGLEYRIVY DTTEFISDSI SEVYRTIAEA AILVAIVVLV
FLQSWRTAII PIVAIPVSLI GTFAILLAFG FSLNMLTLFG LVLAIGIVVD DAIVVVENVE
RNLARGMTPK QASHVTMDEV GTAVVAISLV LIAVFVPTAF IPGISGQFYR QFAVTISVTT
AISALNSLTL SPALAGILLK THDHETRRAN IATRFGRGLA DGFNRGFDRM SSGYSWTVRH
LVSSWVGLTA AMIAFVCLLG ATWYMSTRVP AGFIPTMDQG YAIVVIQLPD GASLARTDAV
VKQVGDIART VPGVGNAVQF AGFSGATFTN ASNAGVVFVP FKSFAEREEG GENANKIIGE
LYGKLQSIQE AFIIAIPPPS VRGVGNSGGF KMQISDLENA DMTRVLGLAR QMMGAAATTE
GLTGVFTTFS DASPQYFLAI DRDKARFLNV PIPNIFNALS INLGVAYVND FNAFGRVYQV
RAQADRQYRM DREDILALKV RSATGALVPL GTLMDIQDAS GPALVQRYNM YVSVPLQGNP
TPGTSTGDAI AKMEALAAKI LPQGTTFEWT ELAYQETHTG NTAVYIFALS VVFVFLALAA
QYESWVLPLA IILIVPLAVL AALIGVSLRG MDNNVLTQIG LIVLIGLAAK NAILIVEFAR
QAEDEGKSPV EAAIEASHLR LRPILMTAFA FIFGVLPLAI ATGPGAEMRQ SLGTAVFSGM
LGVTIFGLFL TPVFYVVLRG WRRKQPAEKT VEAVPVESET V
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