Gene Rleg2_2857 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg2_2857 
Symbol 
ID6981601 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM2304 
KingdomBacteria 
Replicon accessionNC_011369 
Strand
Start bp2907232 
End bp2908491 
Gene Length1260 bp 
Protein Length419 aa 
Translation table11 
GC content65% 
IMG OID643397569 
Productputative RNA polymerase, sigma-24 subunit, ECF subfamily 
Protein accessionYP_002282353 
Protein GI209550436 
COG category[K] Transcription 
COG ID[COG4941] Predicted RNA polymerase sigma factor containing a TPR repeat domain 
TIGRFAM ID[TIGR02937] RNA polymerase sigma factor, sigma-70 family 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.125085 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAGACA TTGCCTGGAT CGACCTTGCT CTTGCCTCGG CCCGGCCGAA GGCGCTCGGC 
GCGCTGCTGC GCTATTTCCG CAATCTCGAT ACCGCGGAAG AGGCGTTTCA GGAGGCATGC
CTGAGGGCGA TCCGCACTTG GCCGGAAAAA GGGCCGCCAC GCGATCCGAC GGCGTGGCTC
ATCTTCGTCG GCCGAAACAG CGGGATCGAC GCGGTGCGCA AGCGGGCGAA GCTCCAGGCC
CTGCCGGACG AGGATACGAT CTCCGATACC GAGGACGCCG AAAGCGATAT CGCCGGGCGG
CTGGACGATT CCCACTATCG CGACGATATC CTGCGGCTTC TTTTCATCTG CTGCCATCCC
GATCTGCCGG CGACCCAGCA GATCGCGCTG GCGCTGCGCA TCGTTTCCGG CCTTTCGGTG
ACGCAGATCG CCCGCGCCTT CCTGGTGTCG GAAAGCGCCA TGGAGCAACG CATCACCCGC
GCCAAGGCGC GCGTCGCCAA GGCAGGCGTG CCGTTCGAGA CGCCGAGCCC TGAGGAAAGG
GCCGAGCGTC TTACGATCGT CAGCACGATG ATCTATCTCG TCTTCAACGA AGGCTACAGC
CAGGCCGACC CGAAGCATGA GGCGGCCGCC TTCAGCGACG AGGCGATCCG GCTGGCACGG
CTGATGCTGC ACCTCTTTGC GTCCGAACCG GAGTTGATGG GTCTGCTGGC GCTGATGCTT
CTGCAGATCT CGCGCCGGCC GGCGCGCTTC AGCGCCGAAG ATGAGATCGT GCTGCTCGAA
GATCAGGACC GCTCGCTGTG GAACCAGCCT TTCATCAACG AGGCCCTGGC GCTGCTCGAC
AAGGCGCTGC GACACCGCCG GCCCGGCCCG TATCAGCTTC AGGCGGCGAT TGCCGCCATC
CATTCCCGGG CAAAGCGCGC GGAAGACACC GACTGGGTGG AAATCGATCT GCTCTATCGC
GCGCTGGAGC GGGTTCAGCC TTCGCCCGTC GTGACGCTTA ATCGCGCGGT CGTGGTTTCC
AAGCTGCACG GGCCGCAGGA GGCGCTCGAT CTGATCGATC CGCTCGGTGA GAAGCTCGGC
GGCTATTTCT ACTATCACGG CCTGCGGGGC GGGCTGCTGA AGCAGCTTGG CTTGACCCGC
CAGGCGCGCG AAGCCTTCGA CCGCGCGATC GCGCTTGCCC ATTCGGCGGC GGAAGCTGCC
CATATCCGCC GACAGATCGA CAAGATGCAG GCAGAGGCAG CCCAACCGGT CGCAAAATAA
 
Protein sequence
MTDIAWIDLA LASARPKALG ALLRYFRNLD TAEEAFQEAC LRAIRTWPEK GPPRDPTAWL 
IFVGRNSGID AVRKRAKLQA LPDEDTISDT EDAESDIAGR LDDSHYRDDI LRLLFICCHP
DLPATQQIAL ALRIVSGLSV TQIARAFLVS ESAMEQRITR AKARVAKAGV PFETPSPEER
AERLTIVSTM IYLVFNEGYS QADPKHEAAA FSDEAIRLAR LMLHLFASEP ELMGLLALML
LQISRRPARF SAEDEIVLLE DQDRSLWNQP FINEALALLD KALRHRRPGP YQLQAAIAAI
HSRAKRAEDT DWVEIDLLYR ALERVQPSPV VTLNRAVVVS KLHGPQEALD LIDPLGEKLG
GYFYYHGLRG GLLKQLGLTR QAREAFDRAI ALAHSAAEAA HIRRQIDKMQ AEAAQPVAK