Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rleg2_2857 |
Symbol | |
ID | 6981601 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhizobium leguminosarum bv. trifolii WSM2304 |
Kingdom | Bacteria |
Replicon accession | NC_011369 |
Strand | - |
Start bp | 2907232 |
End bp | 2908491 |
Gene Length | 1260 bp |
Protein Length | 419 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 643397569 |
Product | putative RNA polymerase, sigma-24 subunit, ECF subfamily |
Protein accession | YP_002282353 |
Protein GI | 209550436 |
COG category | [K] Transcription |
COG ID | [COG4941] Predicted RNA polymerase sigma factor containing a TPR repeat domain |
TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.125085 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACAGACA TTGCCTGGAT CGACCTTGCT CTTGCCTCGG CCCGGCCGAA GGCGCTCGGC GCGCTGCTGC GCTATTTCCG CAATCTCGAT ACCGCGGAAG AGGCGTTTCA GGAGGCATGC CTGAGGGCGA TCCGCACTTG GCCGGAAAAA GGGCCGCCAC GCGATCCGAC GGCGTGGCTC ATCTTCGTCG GCCGAAACAG CGGGATCGAC GCGGTGCGCA AGCGGGCGAA GCTCCAGGCC CTGCCGGACG AGGATACGAT CTCCGATACC GAGGACGCCG AAAGCGATAT CGCCGGGCGG CTGGACGATT CCCACTATCG CGACGATATC CTGCGGCTTC TTTTCATCTG CTGCCATCCC GATCTGCCGG CGACCCAGCA GATCGCGCTG GCGCTGCGCA TCGTTTCCGG CCTTTCGGTG ACGCAGATCG CCCGCGCCTT CCTGGTGTCG GAAAGCGCCA TGGAGCAACG CATCACCCGC GCCAAGGCGC GCGTCGCCAA GGCAGGCGTG CCGTTCGAGA CGCCGAGCCC TGAGGAAAGG GCCGAGCGTC TTACGATCGT CAGCACGATG ATCTATCTCG TCTTCAACGA AGGCTACAGC CAGGCCGACC CGAAGCATGA GGCGGCCGCC TTCAGCGACG AGGCGATCCG GCTGGCACGG CTGATGCTGC ACCTCTTTGC GTCCGAACCG GAGTTGATGG GTCTGCTGGC GCTGATGCTT CTGCAGATCT CGCGCCGGCC GGCGCGCTTC AGCGCCGAAG ATGAGATCGT GCTGCTCGAA GATCAGGACC GCTCGCTGTG GAACCAGCCT TTCATCAACG AGGCCCTGGC GCTGCTCGAC AAGGCGCTGC GACACCGCCG GCCCGGCCCG TATCAGCTTC AGGCGGCGAT TGCCGCCATC CATTCCCGGG CAAAGCGCGC GGAAGACACC GACTGGGTGG AAATCGATCT GCTCTATCGC GCGCTGGAGC GGGTTCAGCC TTCGCCCGTC GTGACGCTTA ATCGCGCGGT CGTGGTTTCC AAGCTGCACG GGCCGCAGGA GGCGCTCGAT CTGATCGATC CGCTCGGTGA GAAGCTCGGC GGCTATTTCT ACTATCACGG CCTGCGGGGC GGGCTGCTGA AGCAGCTTGG CTTGACCCGC CAGGCGCGCG AAGCCTTCGA CCGCGCGATC GCGCTTGCCC ATTCGGCGGC GGAAGCTGCC CATATCCGCC GACAGATCGA CAAGATGCAG GCAGAGGCAG CCCAACCGGT CGCAAAATAA
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Protein sequence | MTDIAWIDLA LASARPKALG ALLRYFRNLD TAEEAFQEAC LRAIRTWPEK GPPRDPTAWL IFVGRNSGID AVRKRAKLQA LPDEDTISDT EDAESDIAGR LDDSHYRDDI LRLLFICCHP DLPATQQIAL ALRIVSGLSV TQIARAFLVS ESAMEQRITR AKARVAKAGV PFETPSPEER AERLTIVSTM IYLVFNEGYS QADPKHEAAA FSDEAIRLAR LMLHLFASEP ELMGLLALML LQISRRPARF SAEDEIVLLE DQDRSLWNQP FINEALALLD KALRHRRPGP YQLQAAIAAI HSRAKRAEDT DWVEIDLLYR ALERVQPSPV VTLNRAVVVS KLHGPQEALD LIDPLGEKLG GYFYYHGLRG GLLKQLGLTR QAREAFDRAI ALAHSAAEAA HIRRQIDKMQ AEAAQPVAK
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