Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rleg2_2055 |
Symbol | |
ID | 6980794 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhizobium leguminosarum bv. trifolii WSM2304 |
Kingdom | Bacteria |
Replicon accession | NC_011369 |
Strand | - |
Start bp | 2118997 |
End bp | 2121225 |
Gene Length | 2229 bp |
Protein Length | 742 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 643396777 |
Product | OmpA/MotB domain protein |
Protein accession | YP_002281565 |
Protein GI | 209549648 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG2885] Outer membrane protein and related peptidoglycan-associated (lipo)proteins |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
|
Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.124789 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGGCATGA AATCAAGATT GTTCGCAAGC GCGGCTTTTC CGCTGCTTTC CCTCTCGCTG GCATTCCAGC CGGCATCGGC AATGGCTGCC GTGCGCGACG TCGCGACGCA GGCTCAGGCC GTGCGGCAAG TCGAACAAGG CAGTTTCGAG GTGGCGCAGG ACGCGCCTCA GGATGCGCCT TCCGATGAGG ATTTGCTGAA GAAGAAGCGC AAACAGAAGG AAGAGGCTCC GGCCGAAAAG GCACCCACCG CCGAGCAGCC GAAGGAGGCG CCCGCCGAAA AGCCGAAGGC CGAGCGCAAG GAGGCACCGG CGCCCGAACC CAAGGCGCCC GAACCCAAGG CAGAGCCGGA ACCGCCGAAG GCCGAAGCGC CGAAGGAAAA ACCCGCGCCG CAGGCCGAAA GCAAACCAGA GCGGAAGGCC AAGCAGGAGG CTCAGCCCGA GGCCCAGCCG GAGGCCGCGC CGCAGCAGGA GCAGCCGGTA ACGCAGGAGA AGCCGAGGAA GCCGAAGAAG CAGGCCGAGC CGGAGGCTCA GCCGCAGCCC GAACAGCAGC CGGCGGCAAA GGAAGCGCAG CCGGAGACGG AGCAGGCGCA GCCGGAAGCC AAGCCGGAAG GCGGCAAGCG CGCCAAAGGG CAGGACAAGG CCCAGGGCAA GGATAAAGGC AAGGAAAAGA CCGAGACTGC GGCTCCCGAA GCCGTGACGC CAGCCGAGGA ACAGGCCAAA CCCGAAGTCA AGCCGGAGGC AAAACCCGCC GCCGAAGCAC CGGCAGAGAA GAAGCCGGCA AAGGGCGAAG CCGCAGCACC CGCGGAGAAG CCGACCGAAG GCAAGGCAAC TGTAGATAAG GCAACTGAAG GCAAGGCGAC CGAAGATAAA GCGGCGGCAC CAGAAGCCGT ACCCGCCGAA AAGCCGAAGG ACGGCACCGC CGCAAAGCCT GCCGGCGAAC AGCCCGCCGG CGCACAGCCG ACCGCGCCGG CGACCGACAC AGCTCAGCCG TTGCCGGATG CCAGCGGCGG CAAGCAGGCC GAGCAGGCCA TTCCGGCGCC GGAAAAGGTT TCGCCCGAAG AGCTGGAGCG CCGCAAGAAG ATTGCCGCGG ATCCGGCCAA GAGCAACGAG ACCGTCGTGC TGCCGGTCGA AAACGGTGCC GCCGTGCTCG ACAGCGACAA GGATGCCGAC CGCAGCAAGG GCCGCGAAGG CCGCCGCGAC CGCGACAAGA TGCGCGCCGA GACCCAGGAG GTGAAGGTGC CGACCTCGGA TGCCGATGCG CAGGCCGCCA GCGGCGCCAA GGCGGCGCCG ACGATCAAGC TTGAAGCGGT GACCAGCGAG AAGGGTAGAA AGCTCGATGC GCGGCCGCAA TTCGTCCGTC CCGAGGGTGC GCGCGTCGAC GATAGCACCG ACGACAATCG TGTGATCATC CAGTACGACA ATCGGGTGAT CGTGCGTGGC GACGACGACA GGCGGTTCCT GCGCGACGGC GAACGGCCGA GCTACGAGGA GCTGTCGGGT GATCGCTACC GCGAGACGAT CACGCGGCCG GAGGGTTACC GCATCGTGAC GATCCGCAAT CGCTACGGCG ACATCATTCA ACGGTCGCGC GTCGACGCCC GCGGGCGCGA GCATGTGCTC TATTATTCGC AGGACCTCTA CGACGATCCG GACCGCGACT ATTTCGAGGA TCCGGGTGCC GACCTGCCGC CGATGCGGCT GCGCGTACCG CTCAACGATT ACATCATCGA TACTCGCAGT GACCCGGACC GGGATTATTA CGAGTTCCTG AGCGAGCCGC CCGTCGAGCC GGTGGAGCGT GTCTACTCGC TTGACGAGGT GAAGTATTCG GCCCGTATCC GCGACAAGGT GCGCCGCATC GACCTCGACA CGATCACCTT CGCGACCGGC AGCGCCGATA TCCCGATGAC GCAGGCGCGC ACCCTGCGCA AGGTTGCCGA CGCGATCAGC CAGGTGCTGA AAAAGGATCC GAGCGAAACC TTCCTGATTG AGGGTCATAC GGATGCCGTC GGAACCGATC AGAGCAACCT GGTCCTCTCC GACCAGCGGG CGGAATCGGT CGCGAACGTG CTCTCCGACG TCTACGGCAT CCCGCCGGAA AACTTGGCGA CCCAGGGCTA TGGCGAGCAA TATCTGAAGG TCAACACGTC AGGCCCCGAA CAGGAAAACC GCCGCGTCAC CGTCCGCCGC GTGACGGCGC TGGTTCGGCC GGTGGCTGCC AACCAGTAA
|
Protein sequence | MGMKSRLFAS AAFPLLSLSL AFQPASAMAA VRDVATQAQA VRQVEQGSFE VAQDAPQDAP SDEDLLKKKR KQKEEAPAEK APTAEQPKEA PAEKPKAERK EAPAPEPKAP EPKAEPEPPK AEAPKEKPAP QAESKPERKA KQEAQPEAQP EAAPQQEQPV TQEKPRKPKK QAEPEAQPQP EQQPAAKEAQ PETEQAQPEA KPEGGKRAKG QDKAQGKDKG KEKTETAAPE AVTPAEEQAK PEVKPEAKPA AEAPAEKKPA KGEAAAPAEK PTEGKATVDK ATEGKATEDK AAAPEAVPAE KPKDGTAAKP AGEQPAGAQP TAPATDTAQP LPDASGGKQA EQAIPAPEKV SPEELERRKK IAADPAKSNE TVVLPVENGA AVLDSDKDAD RSKGREGRRD RDKMRAETQE VKVPTSDADA QAASGAKAAP TIKLEAVTSE KGRKLDARPQ FVRPEGARVD DSTDDNRVII QYDNRVIVRG DDDRRFLRDG ERPSYEELSG DRYRETITRP EGYRIVTIRN RYGDIIQRSR VDARGREHVL YYSQDLYDDP DRDYFEDPGA DLPPMRLRVP LNDYIIDTRS DPDRDYYEFL SEPPVEPVER VYSLDEVKYS ARIRDKVRRI DLDTITFATG SADIPMTQAR TLRKVADAIS QVLKKDPSET FLIEGHTDAV GTDQSNLVLS DQRAESVANV LSDVYGIPPE NLATQGYGEQ YLKVNTSGPE QENRRVTVRR VTALVRPVAA NQ
|
| |