| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rleg2_1814 |
|---|
| Symbol | |
|---|
| ID | 6980552 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhizobium leguminosarum bv. trifolii WSM2304 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011369 |
|---|
| Strand | - |
|---|
| Start bp | 1863210 |
|---|
| End bp | 1864082 |
|---|
| Gene Length | 873 bp |
|---|
| Protein Length | 290 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 643396536 |
|---|
| Product | transglutaminase domain protein |
|---|
| Protein accession | YP_002281325 |
|---|
| Protein GI | 209549408 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG1305] Transglutaminase-like enzymes, putative cysteine proteases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.070269 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.00579618 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGACGATTT TCTCCGTCCG CCACATCACG TCCTATCGTT ACGTCAGGGA TGTCGATTTC
GGCGAGCATC GCTTGATGTT CCGGCCGCGT GACAGCTTCG ACCAGCGGCT GATCGAAGCG
TCGTTGACGA TATATCCCGA GGAAAGTCAT GTGCGCTGGA TCCACGATGT TTTCGGCAAT
TGCGTGGCGC TCATCGATAT TTCGAGGCCG GCGTCCGAGC TTCGATTCGA AACCTGGATC
ACGCTCGATC ATACGCCCCA GGTTGCCCTC GACCTCAAGG TGGACGACCA GGCGCTGACC
TATCCGTTCT CCTACGACAA GGACGAGATT GCCGATTTGA CGCCGGCCAT GCAGCGCCAT
TATCCCGACC CCAACGACGA AGTCGGACGC TGGGCACGCC GGTTCGTGCG CCAGGGGCGT
CCGACCGAGA CCGGGCACAT GCTGATGACG CTCTGTTACG CCATTCGGGA AAGCTTCGTC
TATGCGCGCC GGATGGAGCA CGGAACGCAG ACACCGCTGC AGACTTTGCA ACTTCGCTCC
GGCACCTGCC GGGATTTCGC GCTGCTGATG ATGGAGGCGG CACGCGTCCT CGGCCTCGCG
GCGCGGTTTG TCACGGGCTA TGTCTATGTT CCCGACCGGG ACGGCTCCAC CGTGCTCGGC
GGCGGTTCCA CCCATGCATG GTGCCAGGTT TACCTTCCGG GCGCCGGCTG GGCGGAGTTC
GATCCGACCA ACGGGATCGT CGGCAACCGC GATCTCATTC GGGTCGCCGT CGCCCGCGAT
CCGCGTCAGG CCGTCCCGTT GAGCGGCAGC TATGATGGCG ATGGGGCGGA TTTCGACAGC
ATGACAGTGC AGGTCAACGT CACCACGAAG TAA
|
|---|
| Protein sequence | MTIFSVRHIT SYRYVRDVDF GEHRLMFRPR DSFDQRLIEA SLTIYPEESH VRWIHDVFGN
CVALIDISRP ASELRFETWI TLDHTPQVAL DLKVDDQALT YPFSYDKDEI ADLTPAMQRH
YPDPNDEVGR WARRFVRQGR PTETGHMLMT LCYAIRESFV YARRMEHGTQ TPLQTLQLRS
GTCRDFALLM MEAARVLGLA ARFVTGYVYV PDRDGSTVLG GGSTHAWCQV YLPGAGWAEF
DPTNGIVGNR DLIRVAVARD PRQAVPLSGS YDGDGADFDS MTVQVNVTTK
|
|---|
| |