Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rleg2_1338 |
Symbol | rpsC |
ID | 6980066 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhizobium leguminosarum bv. trifolii WSM2304 |
Kingdom | Bacteria |
Replicon accession | NC_011369 |
Strand | + |
Start bp | 1365747 |
End bp | 1366478 |
Gene Length | 732 bp |
Protein Length | 243 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 643396059 |
Product | 30S ribosomal protein S3 |
Protein accession | YP_002280858 |
Protein GI | 209548941 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0092] Ribosomal protein S3 |
TIGRFAM ID | [TIGR01009] ribosomal protein S3, bacterial type |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.0464681 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.115598 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGTCAGA AAATCAATCC AATCGGTTTC CGTCTTGGCA TCAACCGTAC CTGGGATAGC CGCTGGTTCG CGGACAATGC CGAGTACGGC CAGCTGCTGC ACGAAGACCT GAAGATGCGC AAGTTCGTCA TGAGCGAACT GAAGCAGGCA GGGATCTCCA AGGTGGTCAT CGAGCGTCCG CACAAGAAGT GCCGCGTCAC GATCCACTCG GCACGTCCGG GCCTGATCAT CGGCCGCAAG GGCGCCGACA TCGACAAGCT CCGCAAGAAG CTGTCGGATA TGACCAACTC GGAAACGCAC CTCAACATCG TCGAAGTGCG CAAGCCCGAA GTCGACGCAA CGCTGGTCGC TCAGTCGATC GCCCAGCAGC TCGAGCGCCG CGTGGCTTTC CGCCGCGCCA TGAAGCGCGC GGTTCAGTCC GCAATGCGTC TTGGCGCCGA AGGCATCAAG ATCACCTGCG CCGGCCGTCT CGGCGGCGCT GAAATCGCCC GTACGGAATG GTACCGCGAA GGTCGTGTGC CGCTGCACAC GCTGCGCGCC GACATCGACT ACGGCACGGC TGAAGCAGAA ACCGCGTTCG GCATCTGCGG CATCAAGGTC TGGATCTTCA AGGGCGAAAT CCTTGAGCAC GATCCGATGG CTTCCGAGCG CCGTGCGATG GAAGGTGACG CCCAGGGTCC GGCAAGCCGT GATCGTGACC GCGACAGAGA CCGTCGCCGC GACAACGCTT GA
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Protein sequence | MGQKINPIGF RLGINRTWDS RWFADNAEYG QLLHEDLKMR KFVMSELKQA GISKVVIERP HKKCRVTIHS ARPGLIIGRK GADIDKLRKK LSDMTNSETH LNIVEVRKPE VDATLVAQSI AQQLERRVAF RRAMKRAVQS AMRLGAEGIK ITCAGRLGGA EIARTEWYRE GRVPLHTLRA DIDYGTAEAE TAFGICGIKV WIFKGEILEH DPMASERRAM EGDAQGPASR DRDRDRDRRR DNA
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