Gene Rleg2_1092 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg2_1092 
Symbol 
ID6979811 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM2304 
KingdomBacteria 
Replicon accessionNC_011369 
Strand
Start bp1112024 
End bp1112614 
Gene Length591 bp 
Protein Length196 aa 
Translation table11 
GC content60% 
IMG OID643395804 
ProductNUDIX hydrolase 
Protein accessionYP_002280612 
Protein GI209548695 
COG category[L] Replication, recombination and repair
[R] General function prediction only 
COG ID[COG0494] NTP pyrophosphohydrolases including oxidative damage repair enzymes 
TIGRFAM ID[TIGR00052] nudix-type nucleoside diphosphatase, YffH/AdpP family 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.0217104 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.00264715 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGATGCAAC CGAAATCACG GGTGAAGATC GTCGGCGAGG AAACGCTGTC GAATGGCTGG 
ACGCGGTTGA GCAGCTACCT GCTCGATTAT ATCGACAGCA AGGGGGCAAC CCAGCGCTTG
AAGCGGGAGG TATACCACCG CACGCCCGCC GCCTGCATCC TGCTTTATGA TCCGAAACGC
GATCTCGTCA TCCTCGTCCG CCAGTTCCGC CTTGCCGTCC ATATCAACGG CGATCCCGCC
TGGATGATCG AGGTGCCGGC CGGCCTTCTC GATGACGATC ATCCCGAACA GGCGATCCGC
CGCGAGGCGA TGGAGGAAAC CGGTTATCAC CTCCGCGATG CGCGTTTCCT GTTCAAATGC
TATACCTCAC CCGGCGCCAT CACCGAAGTC GTCCACTTCT TCGTCTCGCT GATCGACATC
GCCGACCGCG TGGCGGAAGG CGGCGGCCTG GACGAGGAGC ACGAGGATAT CGAGGTTCTC
GAAGTCCCGC TCGACGAGGC TGCCCAAATG ATCGAAAACG GCGAGATCTT CGACGCCAAG
ACGATCATGC TGCTGCAATG GGCCTTGTTG AACCGGAGTA AACTTCGATA G
 
Protein sequence
MMQPKSRVKI VGEETLSNGW TRLSSYLLDY IDSKGATQRL KREVYHRTPA ACILLYDPKR 
DLVILVRQFR LAVHINGDPA WMIEVPAGLL DDDHPEQAIR REAMEETGYH LRDARFLFKC
YTSPGAITEV VHFFVSLIDI ADRVAEGGGL DEEHEDIEVL EVPLDEAAQM IENGEIFDAK
TIMLLQWALL NRSKLR