| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rleg2_0988 |
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| Symbol | |
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| ID | 6979707 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhizobium leguminosarum bv. trifolii WSM2304 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011369 |
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| Strand | - |
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| Start bp | 1010724 |
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| End bp | 1012799 |
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| Gene Length | 2076 bp |
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| Protein Length | 691 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 643395700 |
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| Product | Lytic transglycosylase catalytic |
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| Protein accession | YP_002280508 |
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| Protein GI | 209548591 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0741] Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.311649 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGAAAG CTGTCCTAAT TCTGTCCGCC TTCGGCTTTA TTGCCGCCGC GTGGAGCAGC
GTAGCGTCGC CGCTTGCCGG CGAAAGCACG GCCATGCCCG CCGTCAAGCC GCTCGGCTTC
ATTCCCGAGA CAGCCATGCC GGAATCGATC ACCACAGGCG CCATTCCGCG CAATCCCGCA
GTCGCGCCCG TCAACGGCGA CCTGAAAGCC GGTCTCGATG CACTTTCCGA CAAGGACCCG
CGGCTGGCGC TGTCGATCCG CGACAATATG CGCGACGGTA CGCTCGATCG CCATATCCTC
ACCTGGGCGA TCGCCGTTTC CGGATTGAAG GGCGTTCCCT CCCATGAAAT CGCCAGTGCT
GCGCAGGAGC TCAAGAGCTG GCCGGGCCTG TCGCGGCTGC GTGCCTATTC CGAACGCGCG
CTTTATGACG AAAACCCCGC CCCATCAGCC GTGCTGGCCG CCTTCGGCGA TACCGCGCCT
GAGACGATGC AGGGCGCCGT CATCCTCGGC CGGGCGCTGG TTGCAACAGG CAAACAAGCG
CAGGCTGCTA AATATATCCG TAAAGTCTGG CGCGGCGAAG CTCTCGACAA GGCGACCGAG
GACCAGATCC TCATCGAATT TTCCGCGCTG TTGACGCCGG CCGACCATAA GGCACGGATG
GACTATCTGA TGTATCGCGG CCGGGTGGCT CAGGCCAAAC GCTTCGGCGA CATGGGCGAG
GCGCAGTCGC TCTACAAGGC ATGGTCCGCC GTCGACGCCG AAGCCGGCAA TGCCGGCGCG
CTGCTTAACG CCGTCGATGC GAGATGGCGC AGCGATGCTG GCCTGCTGTT TGCGCGCATC
GAATATCTGC GCAAGCAGGA CAAATATGCC GAGGCTGCGG CACTGCTGGA ACAGATGCCG
CCCGAGCGCA GCGAGCTCGT CAATTCCGGC GAGTGGTGGA ACGAGCAGCG CATCGTCAGC
CGTGGCCTCG TCGACCAGGG ACAGTTCAAG CCTGCCTATC GCATCGTCGC AAACTACGCC
GCAACCAGCC CGACGGATAT CGTCGAGGCG GAATTCCATG CCGGGTGGTA CGCGCTTCGC
GGCCTGCAGG ATCCGGCAAC GGCGGAAAAG CACTTCCGCA AGATCCTCCA GACATCGAAC
GGGCCGATTT CGGTTTCACG CGCCTGGTAT TGGCTGGGAC GAGCGGCGGA GGCTGGCGGC
CCGGGCAAAT CCAGTGAATT CTATGCGAAG GCTGCGACGT TTCCCGGCAC CTTCTATGGC
CAGCTCGCAG CAGAACGGCT GGGGCGAAAG ACGCTGAACG TTACCTATCC CTCGCCGAGC
ACGGCCGACC GGCAAAACTT CCAGGCACGC GAAGCCGTAC AGGCAATCGC CCGGCTGGAA
GCTGCAGGCC ATGGATGGCG GGCCGACATT CTCTATCTCG CGCTCGCCGA CCAGCTGCAG
AGCCCCGGTG AACTGGCCGT GCTTGCGGCA CAGGCCGAGC AATCCGGCGA TCATCATCTG
TCGCTGCAGA TCGGAAAAAT CGCCTATGGG CGCGGCATCG ATGTCGCAGC GCTCGCCTTT
CCGGTCGGCG TCATTCCGGC GAATGCCAAT ATTTCAGGCT CCGGCAAGGC GCTTGCCTAT
GCCATCGCCC GTCAGGAAAG CGCCTTCAAC CCGGCCGCGG TTTCGGCGGC GAATGCGCGC
GGCCTGCTGC AGCTTCTGCC GGGAACGGCC CAGGCGGTGG CCAAGCGCCA CAACATCGCC
TATTCGAAAG ACAAGCTGAC GGCCGATGCC GGTTATAACG CCACACTCGG CGCGCATTAT
CTCGGCGAGC AGATCGACGC CTTCGGCGGC TCCTATATCC TCACCTTCAT CGCCTATAAT
GCCGGGCCGA AGCGGGTACC GGAATGGATC GGCCGCTACG GCGATCCGCG CGGCAAATCG
ATCGACGAGA TCGTCGACTG GATCGAGCGC ATCCCCTTCC CCGAAACGCG GAACTACGTG
CAGCGGGTGA TGGAGAATTA CGAGGTCTAC AAGGCCCGCC TCGGCCAGTC GACCGATATC
GAGCGTGACC TCATCGGCGG ACGCAGCGCC TCCTGA
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| Protein sequence | MKKAVLILSA FGFIAAAWSS VASPLAGEST AMPAVKPLGF IPETAMPESI TTGAIPRNPA
VAPVNGDLKA GLDALSDKDP RLALSIRDNM RDGTLDRHIL TWAIAVSGLK GVPSHEIASA
AQELKSWPGL SRLRAYSERA LYDENPAPSA VLAAFGDTAP ETMQGAVILG RALVATGKQA
QAAKYIRKVW RGEALDKATE DQILIEFSAL LTPADHKARM DYLMYRGRVA QAKRFGDMGE
AQSLYKAWSA VDAEAGNAGA LLNAVDARWR SDAGLLFARI EYLRKQDKYA EAAALLEQMP
PERSELVNSG EWWNEQRIVS RGLVDQGQFK PAYRIVANYA ATSPTDIVEA EFHAGWYALR
GLQDPATAEK HFRKILQTSN GPISVSRAWY WLGRAAEAGG PGKSSEFYAK AATFPGTFYG
QLAAERLGRK TLNVTYPSPS TADRQNFQAR EAVQAIARLE AAGHGWRADI LYLALADQLQ
SPGELAVLAA QAEQSGDHHL SLQIGKIAYG RGIDVAALAF PVGVIPANAN ISGSGKALAY
AIARQESAFN PAAVSAANAR GLLQLLPGTA QAVAKRHNIA YSKDKLTADA GYNATLGAHY
LGEQIDAFGG SYILTFIAYN AGPKRVPEWI GRYGDPRGKS IDEIVDWIER IPFPETRNYV
QRVMENYEVY KARLGQSTDI ERDLIGGRSA S
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