| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rleg2_0587 |
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| Symbol | |
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| ID | 6979303 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhizobium leguminosarum bv. trifolii WSM2304 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011369 |
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| Strand | - |
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| Start bp | 612629 |
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| End bp | 615817 |
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| Gene Length | 3189 bp |
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| Protein Length | 1062 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 643395299 |
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| Product | diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) |
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| Protein accession | YP_002280110 |
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| Protein GI | 209548193 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGGAGTT TCATTTTGCT ATCCAGGCTG AGCGACAACA AGCAGTTACG GCGCGTGTTG
AAGAATACCC GCGTCTCGTT TCTGGTTTCT TCGCTTGTCG CCCTTGTCGT CATCATGGTC
GGCTTCGGCC TCGATCGGGC CAATACTCAA TCTTATGAGC GCGAACTTCA TATCCGCACC
GAAAGCGAGG CAAACCTCAT CCGCGCCCGG GTCATGGCTG AGATCAATAT GGACCTCAGC
ATGGTCCGCG ACCTTGCCAA TCTGATCTCC GTCAGCGCCG CAAACGGAGA GGAGATGGAG
CGGCAGATCA ACTGGCTGCT GATCCAGAAT CCGTCCTTCA TTCACATCGC GGTCGCACCG
GATTTCATTA TCGATAACGT CTATCCCAGG CTACCCGGCA ATGAGGAGAT CGGCCGCGAC
GTGCGCGCAA CGCTGTTTTC ACGCCAGGCC ATGACGCCGG CGGCCGGCGA TCAGTCGGCG
CGCTTCTATG GCCCTGTCAG CACCGACGGC CGGGACGGCT TTGCAATATT CTTCCCGGTT
TTCGTCAAGG AGAACGGCCA ACGGCGGCTG TGGGGGGCGG TCGAACTCGT CATCGACCAG
CAGATGTTCT ACGAGGCGAC CGGGCTCATG CCGGCGCGCG ACCGCGAGAA CCGGGAACGT
TTTCCGCATC TCAACCATCT ATCGATCGCC CTCCGGGATA TCGGCTCACC GGCGAGGGCC
GCGACAGCCG CGCCGTTCTT CGGGTCCTCC GAGATCGACG ACAAGAATCC GATGCGCCAG
AAGATCGGCT TTGCTGGCGG CAAGTGGGAA CTCTCCGTCG TTCCGAACAG CGGCTGGGAC
GCGATACCGG AAAACCGAAC GGAACTGCGC CTGATCGTCG CGGCCGCCGG CTGCATCATC
ATCGTCCCGA TCTTCTTCGC GACCCTCCTG CTCGGCGAGC GCAATCGCAA CATCACCGAG
CTGGAGACGC GCGAGGCGAA ACTCAAGGAA CTGTCGCAGC GGCTCGATCT GGCGCTGGAA
TCCTCGAATA TCGGCATCTG GGAGCTGGAG GATCACTCGA GCAGCCTGCT CTGGGATGCG
CGTGCCGCGG CCCTGCACGG CAAGCCGGCG CAGGAGGGAA GCCGGGCGCT CGACGAATGG
CTGGCGGCGA TCCTGCCCGA GGACCGCGAG ATCGCCGAAG TGCATTTTTT CAGCTGCAGC
ATCGCCGGCG CCGCCTGCAC GGCCCAGTAC CGCATCCTGC CTGCCGATGG CGGCATCCGG
CATCTCCGCT CGGTCGGCGC CTTTTATACC GATGCCGGCG GCGTCAGCAG GACGATCGGC
ATCGTCTGGG ACGTGACTGC CGATGCGGAG ACGACCGACA CGCTGCGCAA GGCGAAAGAC
ATGAGCGAGG TCAAGAATGC CGAGCTGGAG CTGGCGCTTG AAGAGCTTTC CAGCCGCGAG
GGACAGCTCG CCGAGCTGTC GAGCCGGCTC GACCTGGCGC TCAACTCCTA TCAATGCGGC
ATCTGGGAAG CGCGGCCCGA CCGGGGCGGC TCGATCTGGA ACGAGCGCAT GCACGAGCTC
TATGGGCTTG CGCCGCGCAA TGGTTTCATG ACCGAGGAGA CCTGGCTTGG ATGCATCCAC
CCCGAGGATC GGGGTCTCGC GCTGGAAAGC GCGCGCCACT TCAAGAAGAA CGGCGATACC
CACACCCTCG TCTGCCGGGT GATCGTCGAT GGCGGCGCAG TGCGCTATGT CCGCTCGGTC
GGCAAGGTCC ACCAGACGGG GACCGGCGAG ATGAAGATCA TGGGCATCGC CTTCGATGCC
ACCGAAGACG TGCTGATGAC GATCCGGCTG AAAGCCGCCA AGGACGAGGC GGTCGCCAAG
AATATCGAGC TCGAGCTTGC CAAGAACAGG ATCGAGCACA ATTCGCTGCA CGACCCGCTG
ACCGCCCTCG CCAATCGCCG CAAGCTCGAT ATTGCACTCG AAGAGCTGAC GAATGACGGC
CGCCGGCAGC GGCAGAAATT CTCGATCCTG CACATCGACC TCGACCGCTT CAAGGAGATC
AACGACACGC TTGGCCATGC CGCCGGCGAT GCCATGCTGG TGCATGCCTC CAAGGTGCTC
GCCAAGAATG TCCGCGGCAG CGATATCGTC GCGCGCATCG GCGGCGACGA ATTCGTCATC
CTCGCCCTCG ATGTCGGCGA CACGGAGATG GCGCAGCTTT CGGCGCGGAT CATCGAGGAG
ATGCGCCAGC CGATCGATTT CCAGGGTTTT TCCTGCCGCT GCGGCGTGTC GATCGGCGTG
GCGCTTGCCA ACGGCATTCA CGTCGATGCG CGCAAGGTGC TGATCAATGC CGATATCGCG
CTCTACCGCG CCAAGAGCAC GGGCCGCAAC CGCTTCGAAT TCTTCAATCA CAATCTCCAG
GCCGACATCG TCAACACCAA GCGCACGGCC GACGAGATCC TCGCCGGCAT CGACAATGGC
GAGTTCACCG CCTGGTACCA GCCGCAATTC TCAGCCCGGA CGATGGAGCT GACGGGCGTG
GAGGCGCTGG TGCGCTGGAA ACATCCGGCC AAAGGGTGGC TAGCGCCCGA CAAATTCCTG
CGCATAGCCG ACGAGATCAA TGTCGTGCAG ATGCTCGACC GGATCGTGCT GGAAACCGCG
CTGCGTGACA AGATGCGCTG GACGGCGCAA GGCATTGCCG TCCCCAAGGT CTCGGTCAAT
GTCTCGGCAC GGCGGCTGCA TGACGGCAGC CTGCTGGAAT CGCTCGCCGA TCTGCATATC
CGCCCCGGCG AGCTTTCCTT CGAACTGGTG GAATCGATCT TCCTCGACGA GAGCGAGGAC
GTCGTCTCGC ACAATCTCGA GCACATCAAG GCGCTCGGCA TCGATATCGA GATCGACGAT
TTCGGCACCG GCCATACCTC GATCGTCAGC CTGTTGAAGT TGAAGCCCAA GCGGCTGAAG
ATCGACCGTC AGCTGGTGCA GCCGATCGTC GGCGCCACGC AGGAGCGGGC GCTGGTCCGC
TCGATCATCG ACATTGCCCG CTCGCTCGGC GTCGAGACGG TGGCCGAAGG GGTGGAGACG
GCGGCCCATG CCGAACTGCT GCGCGATCTC GGCTGCGATA TCCTGCAGGG CTATGCCTTC
TCGCGGCCGC TCTCCTTCGA CGATTTCACC ACCGAGGCCA CTGGAGCGGG ATGGCGGCTG
GCATCCTGA
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| Protein sequence | MGSFILLSRL SDNKQLRRVL KNTRVSFLVS SLVALVVIMV GFGLDRANTQ SYERELHIRT
ESEANLIRAR VMAEINMDLS MVRDLANLIS VSAANGEEME RQINWLLIQN PSFIHIAVAP
DFIIDNVYPR LPGNEEIGRD VRATLFSRQA MTPAAGDQSA RFYGPVSTDG RDGFAIFFPV
FVKENGQRRL WGAVELVIDQ QMFYEATGLM PARDRENRER FPHLNHLSIA LRDIGSPARA
ATAAPFFGSS EIDDKNPMRQ KIGFAGGKWE LSVVPNSGWD AIPENRTELR LIVAAAGCII
IVPIFFATLL LGERNRNITE LETREAKLKE LSQRLDLALE SSNIGIWELE DHSSSLLWDA
RAAALHGKPA QEGSRALDEW LAAILPEDRE IAEVHFFSCS IAGAACTAQY RILPADGGIR
HLRSVGAFYT DAGGVSRTIG IVWDVTADAE TTDTLRKAKD MSEVKNAELE LALEELSSRE
GQLAELSSRL DLALNSYQCG IWEARPDRGG SIWNERMHEL YGLAPRNGFM TEETWLGCIH
PEDRGLALES ARHFKKNGDT HTLVCRVIVD GGAVRYVRSV GKVHQTGTGE MKIMGIAFDA
TEDVLMTIRL KAAKDEAVAK NIELELAKNR IEHNSLHDPL TALANRRKLD IALEELTNDG
RRQRQKFSIL HIDLDRFKEI NDTLGHAAGD AMLVHASKVL AKNVRGSDIV ARIGGDEFVI
LALDVGDTEM AQLSARIIEE MRQPIDFQGF SCRCGVSIGV ALANGIHVDA RKVLINADIA
LYRAKSTGRN RFEFFNHNLQ ADIVNTKRTA DEILAGIDNG EFTAWYQPQF SARTMELTGV
EALVRWKHPA KGWLAPDKFL RIADEINVVQ MLDRIVLETA LRDKMRWTAQ GIAVPKVSVN
VSARRLHDGS LLESLADLHI RPGELSFELV ESIFLDESED VVSHNLEHIK ALGIDIEIDD
FGTGHTSIVS LLKLKPKRLK IDRQLVQPIV GATQERALVR SIIDIARSLG VETVAEGVET
AAHAELLRDL GCDILQGYAF SRPLSFDDFT TEATGAGWRL AS
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