Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rleg2_0494 |
Symbol | |
ID | 6979210 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhizobium leguminosarum bv. trifolii WSM2304 |
Kingdom | Bacteria |
Replicon accession | NC_011369 |
Strand | + |
Start bp | 507079 |
End bp | 507996 |
Gene Length | 918 bp |
Protein Length | 305 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 643395206 |
Product | periplasmic binding protein/LacI transcriptional regulator |
Protein accession | YP_002280017 |
Protein GI | 209548100 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1879] ABC-type sugar transport system, periplasmic component |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
|
Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.023475 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.304635 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAACCGC AATCCCTGCT GGGAGCCCTT GCGCTTTTGG CTGTCGCTGT AGTCCCGTCC TTGGCGCAGG AGCCGATCAA GCTCGGCTTT ATAACCAAAT TCCCGGTACC GTTCTTCGCA ACAATGGAGA ACGCAGCCAA GGATTATGCA AAGAGAAATC CCGGCGTCGA GATCATTTAC GGGCAGGGAA CCTCCGCAAC CGACATCGAG GGCCAGATTG CACAGATCGA GTCCATGGTG ACACGAGGCG TGCAGGGCAT TGCGCTCACG CCCGTCGATC CCACCGTGTC CACGGCCCTG GACAAGGCGG TGGCTTCAGG CGTCAAGGTC GTCCTGATGG ATAACAATAT TCCGGATTGG AAAGGCAGGA CGGCGCTTGC CACGACCAAT AATTTTGCCG CGGGCAAGAT CGCCGGCGAA TATCTCAAAA CGGTTCTTAA AGCTGGCGAT ACGCTCGGGA TTCTCGAGGG TGTGCCCGGT GTGCCAGCGC TTGATGACCG TGTGAAGGGT ATGCTTGAAG GGCTGCAGGG CCTTGACGTC AAGATCGTCG GGAAAGGCGC AACAAACTGC ACCGAGGAAC TCGGGATCAG TGTCGCCGAA GATCTGCTGA CGAAGAACCC GGACCTCAAG GCCATTTACG CCGCTTGCGG CCCGCCCGCT GCTGGCGCTG CACGCGCAAT CAAGAATTCC GGCACTGCCA ATGACAAGAT CGTGTTGGTC GGTTTCGACT TTTGCTGCGG CGAAGAGGAG GCGCTGAAGA GTGGAGTCGA GGATGCTTCG GTGGCGCAGT TCCCCACCAA GATGGCTGAA CTCGGTGTGG ATGCGCTGGT AAAATCGATT CGCGGAGAGA AGGTGGAGTC TTTGATCGAT TCCGGGGCCG CGCTCGTGAC GCCTGAGAAT ATGGCGCAAT TCAAGTAA
|
Protein sequence | MKPQSLLGAL ALLAVAVVPS LAQEPIKLGF ITKFPVPFFA TMENAAKDYA KRNPGVEIIY GQGTSATDIE GQIAQIESMV TRGVQGIALT PVDPTVSTAL DKAVASGVKV VLMDNNIPDW KGRTALATTN NFAAGKIAGE YLKTVLKAGD TLGILEGVPG VPALDDRVKG MLEGLQGLDV KIVGKGATNC TEELGISVAE DLLTKNPDLK AIYAACGPPA AGAARAIKNS GTANDKIVLV GFDFCCGEEE ALKSGVEDAS VAQFPTKMAE LGVDALVKSI RGEKVESLID SGAALVTPEN MAQFK
|
| |