Gene Rfer_4405 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRfer_4405 
Symbol 
ID3960019 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodoferax ferrireducens T118 
KingdomBacteria 
Replicon accessionNC_007901 
Strand
Start bp172522 
End bp173319 
Gene Length798 bp 
Protein Length265 aa 
Translation table11 
GC content57% 
IMG OID637909613 
ProductUBA/THIF-type NAD/FAD binding fold 
Protein accessionYP_516089 
Protein GI89885891 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0476] Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 2 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCACCT ACAAAATACC CTCTGCGTTT CTCGCAAAGC CGGTCAACGT GGCGGTGATC 
GGAGCGGGCG GTACCGGCTC GGCCGTGATC GCCTGTCTGG CGCAAATGTG CGTCGCGCTG
GAAGCCCTTG GGGCTCCGGG GCTTGATGTC ACGGTCATTG ATGATGACCG GGTGAGTCCG
GCCAACATCG GCCGTCAAGC TTTTGCCCCC TGCGACGTCG GGCAATTCAA GGCCAGCGTG
CTGGTCAACC GTGTCAATCA GACTTTCGGG TTGGATTGGG ATGCGAAAAA TGAACGCCTG
GCTGTTCTGC CTGCCCGTCA CAACTACGAC ATGCCAAGAA TTTACATTGG CTGTGTGGAT
ACCCGAAAAG CCCGACAAGC CATTAAATCC CATTGGGAAG CAAGCTCTAA TAGCGGGTTC
AATGGAACAG CCTGGTGGCT CGATTGCGGA AATACGGCCC ATTCCGGGCA GGTCATTCTT
GGCGTTCTAA CTGAAGGGGT GGTAGAGTTG CCGAGCGCGG GCCACCTCTT TCCGGAGATG
GTAGATGCAA GCCTTGATGC CAGCGATGAC ATGCCCAGCT GTTCACTGCC TGAGGCGCTG
GCCAAGCAAG ACCTGTTCAC GAATCGGACC ATTGCAGATA CAGCCATGAA TTTGCTGTGG
AAGCTGTTTC GCTACGGGGA AACGGATGTC CATGGGGCGT TTGTGAACCT GCAGACGATG
CGCACCAACC CGTTGCCTAT CGATCCCATC GCTTGGGCAC GCATGGGTTA TGCGGCTGAG
GTGGAAGAAG AAGCATGA
 
Protein sequence
MSTYKIPSAF LAKPVNVAVI GAGGTGSAVI ACLAQMCVAL EALGAPGLDV TVIDDDRVSP 
ANIGRQAFAP CDVGQFKASV LVNRVNQTFG LDWDAKNERL AVLPARHNYD MPRIYIGCVD
TRKARQAIKS HWEASSNSGF NGTAWWLDCG NTAHSGQVIL GVLTEGVVEL PSAGHLFPEM
VDASLDASDD MPSCSLPEAL AKQDLFTNRT IADTAMNLLW KLFRYGETDV HGAFVNLQTM
RTNPLPIDPI AWARMGYAAE VEEEA