Gene Rfer_4353 details

Gene Information

• Locus tag: Rfer_4353
• ID: 3959869
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Rhodoferax ferrireducens T118
• Kingdom: Bacteria
• Replicon accession: NC_007901
• Strand: +
• Start bp: 115481
• End bp: 116182
• Gene Length: 702 bp
• Protein Length: 233 aa
• Translation table: 11
• GC content: 58%
• IMG OID: 637909560
• Product: hypothetical protein
• Protein accession: YP_516037
• Protein GI: 89885839
• TIGRFAM ID: [TIGR03114] CRISPR-associated protein, Csf1 family

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTGCGCCG CTCAACTCCA GGTGGGTGAT CTGGCCAAGC TGGTCACAAA AGACACCTTT 
GACAAGGGTT TCAACAACAA GCTCGATATC CACCATCGAG GCGGCGACTT TGTGTGTGGC 
GATTGCGCTG CCCTTTGGTC CAAGGACTAC TTGCAGAGCT ACAGCAAGTC CTACGCAACG 
ACCAAGGGTG TTTTCAAGCT CTCCAGCAAT GAAGATGTGC AGGCATTTTT GTTGTCCCCG 
CCCTCCCCGC CATTTGTCGC GATTTTCAAC ACCCGCCAGC AGCAGCACAT GATCTGGCGC 
ACGCCTGTTT GCCTGAGTCA GGATGTGATG ATTGTGCGGG TTGATGATGA ATTGATCCAC 
ATCCGGCGCC AGCTCGCGCT CGATGGCGCA CGGGCTTGGC GCAGCATCGA GTCATGCATG 
AAAGTGATCG GCATTAAGGG CCTGCCCGCC AGACTTGAAC GCACCTTGTG TGACGAAGGC 
ATGGGCGTGA TCCGGCCCGA TGTCATCAAG GCGGCGCTCG CGCATTCGCC TGCATCGGCC 
AAGGCAATCG GTGTTCTGCA AACCATGCGT GTGGGCGAGT GGTGGGCACT CTGCGCTCTG 
CGCCATATTG ATCAAGACGC GCCTTCGACC TGGCCCACGC CCATCCAGGT TCTCCCCCTG 
GCGCCGGGTG CGCCTGGTTT GCCTGTTGAA GTAGACGACT GA 

 

Protein sequence

MCAAQLQVGD LAKLVTKDTF DKGFNNKLDI HHRGGDFVCG DCAALWSKDY LQSYSKSYAT 
TKGVFKLSSN EDVQAFLLSP PSPPFVAIFN TRQQQHMIWR TPVCLSQDVM IVRVDDELIH 
IRRQLALDGA RAWRSIESCM KVIGIKGLPA RLERTLCDEG MGVIRPDVIK AALAHSPASA 
KAIGVLQTMR VGEWWALCAL RHIDQDAPST WPTPIQVLPL APGAPGLPVE VDD