Gene Rfer_4212 details

Gene Information

• Locus tag: Rfer_4212
• ID: 3961929
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Rhodoferax ferrireducens T118
• Kingdom: Bacteria
• Replicon accession: NC_007908
• Strand: +
• Start bp: 4688277
• End bp: 4688777
• Gene Length: 501 bp
• Protein Length: 166 aa
• Translation table: 11
• GC content: 53%
• IMG OID: 637919025
• Product: transposase
• Protein accession: YP_525430
• Protein GI: 89902959
• COG category: [L] Replication, recombination and repair
• COG ID: [COG3547] Transposase and inactivated derivatives

Plasmid Coverage information

• Num covering plasmid clones: 24
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGTCAAAGT GGAGTTGCTT AGCAACCCCT TCAGCAAACA GGAGCAACCA CTATGAAAGT 
CTCAACTGTA GGCATCGACC TGGCCAGAAT GTTTTCCAGT TGCACGGAGT CAACGAGCTT 
GGCAAGCCCG TCATGAAGAA ACACATACGT CGTGACCAGA TGGCAGAGTT TTTCGTCAAC 
CTGCCAGCTT GTTTGATCGG CATGGAAGCC TGTGGTGGAG CGCACTACTG GGCGCGCAAG 
TTGCATGGCT TTGGCCATAC GGTCAAATTG ATGGCACCCC AGTTCGTCAA GCCTTATGTC 
AAGACCAACA AGAATGATGC GGCCGATGCC GAGGCAATCT GCGAGGCGGT AGCCCGACCC 
AATATGCGCT TTGTGCCAAT CAAAGACGTT GAACAACAAA GCGTATTGGC ATTGCATACG 
GTACGCCAGG GCTTCGTGAA AGCTCGCACG GCTCCCCTCG ATGGAAGGGG TTGGGCGTCA 
TTGGTCGCTA CTCACCGATA A 

 

Protein sequence

MSKWSCLATP SANRSNHYES LNCRHRPGQN VFQLHGVNEL GKPVMKKHIR RDQMAEFFVN 
LPACLIGMEA CGGAHYWARK LHGFGHTVKL MAPQFVKPYV KTNKNDAADA EAICEAVARP 
NMRFVPIKDV EQQSVLALHT VRQGFVKART APLDGRGWAS LVATHR