| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_4118 |
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| Symbol | |
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| ID | 3961816 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | + |
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| Start bp | 4594784 |
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| End bp | 4595959 |
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| Gene Length | 1176 bp |
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| Protein Length | 391 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 637918942 |
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| Product | putative hydrogenase expression/formation protein HupK |
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| Protein accession | YP_525347 |
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| Protein GI | 89902876 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0374] Ni,Fe-hydrogenase I large subunit |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGACAGCGC CTGCACCCGC AACCGCGACT GCGGCCCCTT GGGATACGCT CAACGGGCAG
TACCAACTGT GCCCGGGCAC GCCGCGCAGC ATCGTCGGCC AGCGCCCGGT GCTGGGCGCC
GGGCGACTCG GGCGTTTGCT GCGCGGCCAG CGCGGCGAGC AGGTCGGCCG CACGTTGAGC
AGTGTGTTCA CGCTGTGCGC CCATGCTCAT CGCGGCACCG CCGAGCTGGC CTTGGCGGTC
GCACAGGGCG AGGCAGGGGC CGCGCCGCCC AGTCCGCCAC CGCTGTTGCT GTGGGTCGAG
ACCGCGCGGG ATCACTTGCG CAGCATCGCA CTCGACTGGC CGCAGCGACT GCCCAGCTTG
TCGGCCGACC GCCCGGCGCT GGAATGGCTG CGGGACTGTC CCTTGCCGCT GGCCACCGCC
ACGCGGCTGG ATGCGGCGGC GGCGGGCGCG GCGCTGGACG CTTTGCGCCT GTGGCTGGAG
CAACGCGTCT TCCAGCAATC GGCATCAAGC TGGCTGAGCG CCCACCGGGA CCCCGACGCA
TTGGCGCACT GGTGCCACGC GCAGGCCGCT CGCCTGCCGC CGGCCCATTG CCTGGCCAGT
TGGCAGCCGA TGGCGCACGC CTTGCGGCCA GAGATGCGCG GCCTGAATGT GCTCGATGAG
GATGCGGCGC TGCAGCGTGC CCAGTTGCGC CAGTTGGCGC AAACCCTGGT CGATCAGCCC
GACTTTGCGC AACAGCCAAC GTGGCTGGGC CAGTGCTTTG AGAATGGTCC CTGGACGCGC
CTGCGCCACC GGCAAACTCA AACGGCTACG CCGCACAGCG CCTGGACGCG CTTGAGCACG
CGCTGGCTGG AACTGATCGA AATTGCGGCT GCTTCTGCGC CAACCCAAAG TCTGGGCCGG
GTCGCGCTGT TGGCCACCGG GGCCATGAAG CTGGGCCCTG GCCAGGCCCT GGCCTGGTGC
GAAATGGCGC GCGGCCTGCT GCTGCACTGG GTGCAACTCG ATGCCCAAGG CGCGGTGCAG
GACTACCAGG TGGTGGCGCC CACGGAGTGG AATTTCCATC CCGACGGGGC ACTGGCGCGC
GCCGTGGCGG CCTTGCCAGC CGGCGATACG CTAGGCGCCA GCACACTGGC GGCGGCCTTT
GACCCTTGTG TGCTCTGCAC GATCAAACAG GTATGA
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| Protein sequence | MTAPAPATAT AAPWDTLNGQ YQLCPGTPRS IVGQRPVLGA GRLGRLLRGQ RGEQVGRTLS
SVFTLCAHAH RGTAELALAV AQGEAGAAPP SPPPLLLWVE TARDHLRSIA LDWPQRLPSL
SADRPALEWL RDCPLPLATA TRLDAAAAGA ALDALRLWLE QRVFQQSASS WLSAHRDPDA
LAHWCHAQAA RLPPAHCLAS WQPMAHALRP EMRGLNVLDE DAALQRAQLR QLAQTLVDQP
DFAQQPTWLG QCFENGPWTR LRHRQTQTAT PHSAWTRLST RWLELIEIAA ASAPTQSLGR
VALLATGAMK LGPGQALAWC EMARGLLLHW VQLDAQGAVQ DYQVVAPTEW NFHPDGALAR
AVAALPAGDT LGASTLAAAF DPCVLCTIKQ V
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