Gene Rfer_4117 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRfer_4117 
Symbol 
ID3961815 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodoferax ferrireducens T118 
KingdomBacteria 
Replicon accessionNC_007908 
Strand
Start bp4593586 
End bp4594590 
Gene Length1005 bp 
Protein Length334 aa 
Translation table11 
GC content68% 
IMG OID637918941 
Producthypothetical protein 
Protein accessionYP_525346 
Protein GI89902875 
COG category[R] General function prediction only 
COG ID[COG1242] Predicted Fe-S oxidoreductase 
TIGRFAM ID[TIGR01212] radical SAM protein, TIGR01212 family 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGTCTTCCT GGCGCCGCGC GGTCACGGCG CACCGGATGA ATCCAGCCGC CAGCTCGCCT 
TTTGGCGAAC GTCGCTACCA CGCCTGGAAC GACCATGTGA AGGCGCGTCA TGGCGGGCGG
GTGCAGAAAG TCTCGGTATT GGCGGGCTTC ACCTGCCCGA ACCGCGACGG CCTGGTCGGC
ACCGGGGGTT GCACGTTTTG CAACAACGCC AGCTTTACGC CGGGCTACCT GCACCGGCGC
CAGGGCATCA CCGAACAGAT CGACGCCGGG CTGGAATTCT TGCATCGGCG CTACCCCGGC
ACGCAGCGCT ACATCGCCTA TTTTCAGAGC TACAGCAACA CCTACGGCGA ATCCGAGCGG
CTGCGCGCCT GCTACGCCGA GGCGCTGGCC CATCCGCAGA TCAGCGGGCT GGCCATCGGC
ACCCGCCCCG ACTGCCTGCC CGACGGGGTG CTGGACTACC TTGCCGAGCT GTCGGGCCAC
GCCATCATCG AACTTGAAAT CGGTGTCGAG TCCTGCAACG ACGCGGCGCT GGCGCGGGTC
AATCGCGGCC ACGATTTTGC CGCCAGCGTC GACGCCATCG AGCGGGCGGC GGCGCGCGGA
CTGGAAGTCA CCGCCCATGT CATGCTCGGG CTGCCGGGCG AATCCCACGC CAGCATGCTG
GACGGCGCGC GCCAGCTCTC GGCGCTGCCG ATCCATGCGC TGAAACTGCA TCAGCTGCAA
CTAGTGCGCG GCACCGCGCT GGCGCGCGAA TGGCAGCGCA ATCCCGAGGC CGTGCCGCTG
CTCGATGAGC AGGCCTGCAT CAGTCTGCTG GTCGATTTCA TCGAGCGCCT GTCGCCTCGG
GTCCTGCTGC AGCGCGTCGG CAGCGAAGTG CCACCGTCAC TCAAACTCGC GCCGGACTGG
AACCTGCGCC TGTCCGAACT CGCGCCGCGC CTGACGGCCG AGCTGGCGCG GCGCTCAAGC
TGGCAGGGTT GCCGCTATGT AGCGACGGCG CCCGGTCAAG TTTGA
 
Protein sequence
MSSWRRAVTA HRMNPAASSP FGERRYHAWN DHVKARHGGR VQKVSVLAGF TCPNRDGLVG 
TGGCTFCNNA SFTPGYLHRR QGITEQIDAG LEFLHRRYPG TQRYIAYFQS YSNTYGESER
LRACYAEALA HPQISGLAIG TRPDCLPDGV LDYLAELSGH AIIELEIGVE SCNDAALARV
NRGHDFAASV DAIERAAARG LEVTAHVMLG LPGESHASML DGARQLSALP IHALKLHQLQ
LVRGTALARE WQRNPEAVPL LDEQACISLL VDFIERLSPR VLLQRVGSEV PPSLKLAPDW
NLRLSELAPR LTAELARRSS WQGCRYVATA PGQV