| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_4102 |
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| Symbol | |
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| ID | 3961800 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | + |
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| Start bp | 4576747 |
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| End bp | 4578174 |
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| Gene Length | 1428 bp |
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| Protein Length | 475 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637918926 |
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| Product | two component, sigma54 specific, Fis family transcriptional regulator |
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| Protein accession | YP_525331 |
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| Protein GI | 89902860 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCGGGC GCGCACCCCT GGCGGTGTTG GTGGTGGATG ACGAACAGCG CTCGCTGGAG
ACGCTCAAAC GCACGCTGGA TGACCATTTC ACCGTGTTCA CGGCCTCGTC GGCTGAACAA
GGCAACGCCG TGATGGCGCA GGAGTTGGTG CAGATTGTGC TGTCGGACCA GCGCATGCCC
GGCACCTCGG GTGTGGCATT TTTGCGCGGC GTGCGCGCCC AGTGGCCCAA CACCGTGCGG
CTCATCTTGT CGGGTTACAC CGAAGCCGAA GACATCATCA CCGGCATCAA CGAGGCCGGC
ATCTGGCAAT ATCTGCTCAA ACCCTGGCAC CCGGACCAAT TGCTGCTGAC GCTGCAAAGT
GCCGGCGAGC TGTGGCGCTT GCAGCAGGAA AACCAGCGCC TGACGCTGGA GCTGCGCGCC
AGCCCCGAAA ACCTGGCCCT GCGCGTCTTC AGCCTGCGCC AAAAAGCCAA AGCGCTAGCG
GGCTTCGACA AGTTGATCCG CGCCGACAGC AGCCCGCTCA ATGAAGTCTG TGCGCTGGCC
GAGCGGGTGG CTGGCCACGA CCTGTCGGTG CTGATCACCG GTGAATCGGG CACTGGCAAA
GAGCTGCTGG CACGCGCCAT CCACTACGCC AGCGCCCGCG CCGAACAGCC TTTTGTGGTG
GAAAACTGCG GCGCCATGCC CGACACCTTG CTGGAGAGTG AGCTCTTTGG CCACAAGCGC
GGCGCCTTTA CCGGCGCCAC CGACACCCAC ATCGGCCTGT TTCAGCAGGC CGATGGCGGC
ACGCTGTTTC TGGATGAAAT CGGCGAAACG TCGCCCGCCT TCCAGGTCAA GCTGCTGCGG
GCGCTGCAAG AGGGAGAAAT CCGCCCGGTC GGCAGCCCAC GCTCGGTCGG CGTCGATGTG
CGCCTGATCG CCGCCACCAA CCGCGATCTG GAAGCCGATG TGGCGAGTGG GCGCTTTCGT
GAAGACCTGT ACTACCGCGT GGCCGGCATC ACGCTGTACC TGCCGGCGCT GCGCGAACGT
GCGCAGGACA TCGAGCCGAT CGTGACCGAT ATGCTCAAAA AGTCACCCCT GGTCGGGCGA
AGAATGTCGC GTGAAGCCCT GAACCTGCTG ACCCGCCACG CCTGGCCCGG CAACGTGCGT
GAACTGCAAA ACGAGATTCG CCGGGCGCTG GCGCTGGGCG ACGGCCCCGT GCTGGGCGCT
GAACTGCTGT CACCGCGCGT GCGCCAGACC GCCGCCCTGC CCGATCCGGT GTCTGACGCC
GTTGAAGAAG AATCAGGGCA GCTCAAACAC CATCTGGATC GTATGGAGGC CCAACTGATC
CGGGATGCCA TGCTGCGTCA CAAGGGCAAT AAAACCCACG CCGCTGACGA ACTCGGTTTG
ACGCGGGTTG GGCTGCGGAT GAAGATGATG CGGCTCGGGC TCGGGTGA
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| Protein sequence | MSGRAPLAVL VVDDEQRSLE TLKRTLDDHF TVFTASSAEQ GNAVMAQELV QIVLSDQRMP
GTSGVAFLRG VRAQWPNTVR LILSGYTEAE DIITGINEAG IWQYLLKPWH PDQLLLTLQS
AGELWRLQQE NQRLTLELRA SPENLALRVF SLRQKAKALA GFDKLIRADS SPLNEVCALA
ERVAGHDLSV LITGESGTGK ELLARAIHYA SARAEQPFVV ENCGAMPDTL LESELFGHKR
GAFTGATDTH IGLFQQADGG TLFLDEIGET SPAFQVKLLR ALQEGEIRPV GSPRSVGVDV
RLIAATNRDL EADVASGRFR EDLYYRVAGI TLYLPALRER AQDIEPIVTD MLKKSPLVGR
RMSREALNLL TRHAWPGNVR ELQNEIRRAL ALGDGPVLGA ELLSPRVRQT AALPDPVSDA
VEEESGQLKH HLDRMEAQLI RDAMLRHKGN KTHAADELGL TRVGLRMKMM RLGLG
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