| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_4034 |
|---|
| Symbol | |
|---|
| ID | 3961713 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodoferax ferrireducens T118 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007908 |
|---|
| Strand | + |
|---|
| Start bp | 4497119 |
|---|
| End bp | 4498537 |
|---|
| Gene Length | 1419 bp |
|---|
| Protein Length | 472 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 637918858 |
|---|
| Product | glucose-6-phosphate 1-dehydrogenase |
|---|
| Protein accession | YP_525263 |
|---|
| Protein GI | 89902792 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0364] Glucose-6-phosphate 1-dehydrogenase |
|---|
| TIGRFAM ID | [TIGR00871] glucose-6-phosphate 1-dehydrogenase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGGTCTGG AGATGCCCGA CAGTGCGCAG CGCGCGCCAG CGCCCTCCGA CGCGCTGGTG
CTCTTTGGCG TGACTGGCGA CCTGGCGTTC AAAAAAATCT TCCCGGCGCT CTATGCGATG
TGCCGTGAGG GGACGCTGAG CGTGCCGGTG ATTGGCGTGG CCTCGTCGGC CTGGACCGTC
GAGCAGTTGC GCGAGCGTGC GAGGCAGAGC GTGGAGGCCA ACGGCGCCGT GGACGACCCG
GGCGCGCTCG AGCGCTTGCT GTCGTTGCTG CAGTATGTGA GCGGCGACTA CAAGGAGCCT
GGCACCTTCG ACGCGCTCAA AAAGACCTTG GGCCAGGCGC GGCGCCCGAC GCATTACCTG
GCCATTCCAC CCGCGCTGTT TTCAAACGTC ATCCGGGGAC TCGGCAGCGC CGGTCTGGGC
GCGCAGGCCC GCGTGGTTGT AGAGAAGCCG TTCGGGCGCG ACCTGGCCTC GGCACGCGAG
CTCAACCGCG TCGCGTTTGA GGTATTTGCC GAAGACGCGA TCTTTCGCAT CGATCACTTC
CTGGCCAAGG AAGCGATCAT GAACATCCTG TATTTCCGCT TCGCCAACTC TTTTCTTGAG
CCGATCTGGA ACCGCAACCA CGTCGCGAGT GTGCAAATCA CGCTGGCCGA GAAGTTCGGC
GTGCTGGGCC GCGGCGCGTT TTACGAGAGC GCCGGCTGCC TGCGCGACGT GGTGCAGAAC
CATTTGTTCC AGATCGTCGC CCTGCTCGCG ATGGAGCCGC CGGCGTACCA GGGCTTCGAT
GCGGTGCACA GCGCCAAGGC GAACGTTTTT CAGGCCATGC GCCCGCTGCA ACCGACCGAC
CTGATGCGGG GCCAGTACGT CGGCTACCGC GACGAGCCCC ACGTCGCACC GGACTCTGAC
GTCGAGACCT ACTGCGCGCT GCGGCTGCAC ATTGATTCCT GGCGCTGGGC CGGGGTGCCG
TGGTACCTGC GCTCGGGCAA ATGCCTGGCC GACACCGCCA GCGAGGTGCG GGTGCAACTC
AAGCCGCCAC CGCAACGACT GTTCGCGGAT GCCGCAGCGG CCGGTGACCA TGCCAACTAC
CTGCGCTTCC ATTTGTCGCC GTGTTCGTCG ATCGCGCTGG CCGCGCGCGT CAAGCGCGCT
GGCAAGGACT TTGTCGGCGA ACAACGCGAG CTGCTGTTAA CCGAGGAGGA ACGCGTCGAA
GAAACGCCGT ATCAGCGCCT GCTCAGCGAC GCGATGGCGG GTGCAGACGC GCTGTTTACC
CGGGAAGACG CGGTGGAGGC GGCGTGGGCG GTGGTCGATC CGGTGCTGGA AGACCATCAG
GCGGCGCACC CCTATCCACC CGGCAGCTGG GGCCCGCAGG CGGGCGATGC ATTGATCGCC
GCCGACGGCG GCTGGCACAA CCCGGAACCG GCCTGCTAG
|
|---|
| Protein sequence | MGLEMPDSAQ RAPAPSDALV LFGVTGDLAF KKIFPALYAM CREGTLSVPV IGVASSAWTV
EQLRERARQS VEANGAVDDP GALERLLSLL QYVSGDYKEP GTFDALKKTL GQARRPTHYL
AIPPALFSNV IRGLGSAGLG AQARVVVEKP FGRDLASARE LNRVAFEVFA EDAIFRIDHF
LAKEAIMNIL YFRFANSFLE PIWNRNHVAS VQITLAEKFG VLGRGAFYES AGCLRDVVQN
HLFQIVALLA MEPPAYQGFD AVHSAKANVF QAMRPLQPTD LMRGQYVGYR DEPHVAPDSD
VETYCALRLH IDSWRWAGVP WYLRSGKCLA DTASEVRVQL KPPPQRLFAD AAAAGDHANY
LRFHLSPCSS IALAARVKRA GKDFVGEQRE LLLTEEERVE ETPYQRLLSD AMAGADALFT
REDAVEAAWA VVDPVLEDHQ AAHPYPPGSW GPQAGDALIA ADGGWHNPEP AC
|
|---|
| |