Gene Rfer_3970 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRfer_3970 
Symbol 
ID3961630 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodoferax ferrireducens T118 
KingdomBacteria 
Replicon accessionNC_007908 
Strand
Start bp4436684 
End bp4437835 
Gene Length1152 bp 
Protein Length383 aa 
Translation table11 
GC content60% 
IMG OID637918794 
Producthypothetical protein 
Protein accessionYP_525199 
Protein GI89902728 
COG category[V] Defense mechanisms 
COG ID[COG0842] ABC-type multidrug transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTGCTGG CTTTGATGAA AAAAGAACTG CTGGCGTTGT CACGCGACAT CCATGGCATG 
GGGGCGCTGT TCATCATGCC GATGGTGTTC ATCATCGTCA TGTCGATGGC GCTGAAAGAC
GTCTACACCC CCGCTACCAA GAGCCTGGCC TACGCCGTCG TCAATCAGGA CCAAGGAAAA
ACGGCCGACA AACTGATCGA ACGCTGGACC CAGGAAGCAG GAGCCGCACA GCCATTGCCC
GAACAATGGC AAGACGAAGT GCGCGCCGGC CGCCTGAAAT ATGTGTTGCT GGTTGAAGCG
GGATTTTCCA AAGTCATGGA TGACCTTGCC AGTCATGGTG ATGCCAAAGC GCGCCTGCTC
ACCGAGCCCG GTCTAGACAA CAGCGTGTTC GCGACCAACC GCATGCGTCT GCTCGCCATC
GCCGCACAAC TGCGTGTGGA AGGCCTGCTG GCCAAGCTGC CCCGCCAACT GAATACCTCC
GCGCTGACGG GTGACGCGCC CGTGGCGGCG GAGCGCATGA GCGTGGGGCC GCGCCCGACT
GCGGTGCAGC AAAACGTGCC CGCCTGGCTT GTATTCGGCA TGTTCTTTGT GGTGGCTTCT
ATCGCGGGCT TGTTCGTGGA AGAACGTGCA TGCGGCGCCC TGTCGCGCTT GCGCAGCCTG
GGTGCCAGGC CGTGGCAGTT GATCGTGAGC AAAATTATTC CTTATCTGGC CGTCAACGGC
GTACAGGCGG CGCTGATGCT GGCGGTCGGT GTCTGGCTTA TGCCCCAGAT CGGCGGTGAA
GGTTTGTCGC TTCAGGGTAT TGACTGGGGC GCGTTGCTGC TGATGCTGTT GGCCATCAGT
CTGGCCGCCG TCAGTCTGGC GTTGACCGTA GCCTGTCTCG TCAGCACCCA CGCGCAGGCC
GCCACCTTGG GCCCCATTCT CAACGTGCTG ATGGCCGCCT TGGGCGGCGT AATGGTGCCA
CTGTTTGTGA TGCCTCCAGT GATGCAAAAG ATTGCAGCCT ACTCCCCCAT GAACTGGGGT
CTGGAAGGCT TGCTTAATGT GTTGCTCCGC AACGGCGACG TCGCCAGCGT ACTGTCCCAA
GTCGGCCGAC TGGCGGGTTT TTCAGCGCTG ATGTTGATGA TTGCCTTTTT ACTGTTCCGA
CGGCGGATTT GA
 
Protein sequence
MLLALMKKEL LALSRDIHGM GALFIMPMVF IIVMSMALKD VYTPATKSLA YAVVNQDQGK 
TADKLIERWT QEAGAAQPLP EQWQDEVRAG RLKYVLLVEA GFSKVMDDLA SHGDAKARLL
TEPGLDNSVF ATNRMRLLAI AAQLRVEGLL AKLPRQLNTS ALTGDAPVAA ERMSVGPRPT
AVQQNVPAWL VFGMFFVVAS IAGLFVEERA CGALSRLRSL GARPWQLIVS KIIPYLAVNG
VQAALMLAVG VWLMPQIGGE GLSLQGIDWG ALLLMLLAIS LAAVSLALTV ACLVSTHAQA
ATLGPILNVL MAALGGVMVP LFVMPPVMQK IAAYSPMNWG LEGLLNVLLR NGDVASVLSQ
VGRLAGFSAL MLMIAFLLFR RRI