| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_3965 |
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| Symbol | |
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| ID | 3961625 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | + |
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| Start bp | 4432605 |
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| End bp | 4433675 |
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| Gene Length | 1071 bp |
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| Protein Length | 356 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637918789 |
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| Product | pyruvate dehydrogenase (lipoamide) |
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| Protein accession | YP_525194 |
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| Protein GI | 89902723 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1071] Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, alpha subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCGAGCG TCACGCAAGA CACATCCCGG CATCAGGCCT CGCACAACTT CAAGGAGATG
AGCATGCAAG CCAGCCCGGA AAAACTGCTC TGGATGTACG AGACGATGGT CGAAATCCGG
AACTACGAAG AGACCATGGC CAACGTCTAC CTGGAGGGCA AATTGCCGCC CCAGATTCAA
AAAGGACTGG CATTCGATAT TGGCTCCGGC CCCGTGCCCG GTGAGATGCA TCTGGCGGCT
GGTCAGGAGC CGGTCGCGGT CGGCGTTTGC GCCCATCTGA AGAAGGAAGA CACGGTGGTG
GGCACCCACC GGCCGCATCA CTTTGCGATT GCCAAAGGCG TGCCGCTCGA CAAGATGACG
GCCGAGATGT TTGGCAAGGT CACGGGACTG GGCAAGGGCA AGGGCGGCCA CATGCACCTG
TTTGACCCCG AGCACAAGTT CAGTTGCAGC GGCATCATCG GGGCCAGTTT GCCGCCGGCC
TGCGGGGCTG GCCTGGCCGC CAAGAAAATG GGGGAAGACT GGGTGGCGGT TGCGTTCTTT
GGTGAAGGCG CCGCCAATCA GGGTTCGTTT CATGAGTCCC TGAACCTTGC TGCGCTCTGG
CGCTTGCCGG TGATCTTCGT CTGCGAAGAC AACAATTGGG CGATCTCGGT GCCAAAGTCC
AACGCGACCA GTATCGAGTG GGTGGCGGAC CGCGCATCGG CTTACGGCAT ACCCGGCATC
AAGGTCGCGA ACAATGACGC GCTGGAAGTG TATGAGGCGG TGGCGCCCGC GATCGAGCGC
GCCCGTCTCG GCGAGGGCCC GAGTCTGATC GAGGTGAAGA CCGACCGTTA CCTGGGCCAT
TTTCAGGGCG ACCCGGAGGT CTATCGACCC AAGGACGAGG TCAGCAATCT GCGCAAGAAC
GATCCGATCC CGAAGCTGGC CGCCCTGCTG AAAAGCCGCG GCCTGATGAC CGACGCCGAA
GAAGGCGTCA TCGTGGCCCG GGCCAAAGAG CGGGTGGCCG GTGCCTTCGC CTTTGCCCGC
CAGAGCGCCT ATCCGGCCGC GCAGGATGCG CTCAATGATG TCTTTGCCTG A
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| Protein sequence | MPSVTQDTSR HQASHNFKEM SMQASPEKLL WMYETMVEIR NYEETMANVY LEGKLPPQIQ
KGLAFDIGSG PVPGEMHLAA GQEPVAVGVC AHLKKEDTVV GTHRPHHFAI AKGVPLDKMT
AEMFGKVTGL GKGKGGHMHL FDPEHKFSCS GIIGASLPPA CGAGLAAKKM GEDWVAVAFF
GEGAANQGSF HESLNLAALW RLPVIFVCED NNWAISVPKS NATSIEWVAD RASAYGIPGI
KVANNDALEV YEAVAPAIER ARLGEGPSLI EVKTDRYLGH FQGDPEVYRP KDEVSNLRKN
DPIPKLAALL KSRGLMTDAE EGVIVARAKE RVAGAFAFAR QSAYPAAQDA LNDVFA
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