| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_3885 |
|---|
| Symbol | |
|---|
| ID | 3961506 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodoferax ferrireducens T118 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007908 |
|---|
| Strand | - |
|---|
| Start bp | 4336378 |
|---|
| End bp | 4337199 |
|---|
| Gene Length | 822 bp |
|---|
| Protein Length | 273 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 637918710 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_525115 |
|---|
| Protein GI | 89902644 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3246] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGACAAAC TCATCATCAC CGCCGCCTTG ACCGGCGCCG AAGTCACCCG CGAGCAACAA
GCTGCGCTGC CGATCACGCC CGAAGAGATT GGACGCGCCG CCGAGGAATG CTGTCAGGCC
GGTGCGTCGA TGGTTCACGT GCACGCCCGC AACGCCGACG GCAGCCCGAC CCAGGACAAA
GAGGTCTACC GGCAAATCAT GGCGGCGGTG CGCGCGCGTT GCGATGTCAT CGTGCAGGTC
TCCACGGGTG GCGCGGTCGG CATGACGCCC GCCGAGCGTC TGGCGCCGGT GACGCTGGCG
CCCGAAATGG CCACCCTGTC CATGGGGTCA GTCAACTTCG GCGGCGATGT GTTCATGAAC
CACCCCGCTG ATATGGCGGT GTTTCTGCAG GCGATGCAGG AACACGGCGT CAAACCCGAG
CTCGAAATTT TTGATGCCGG CATGCTCACC ACCGCCCATC GCTGGCTCAA AAAAGGCCTG
CTGACCGGCC CGCTGCACTT TGACTTTGTG CTGGGCATAC CGGGCGGCAT GGCGGGTTCG
CCCGAGGCGC TGATGTACCT CAAGGCGCAA TTACCCGAGG GCGCCAGCTG GACCGTGGCG
GGCATCGGTG CGGCGCAACT GCCGCTGGGC ACGCTGGCCA TTGTGCTGGG CGGCCATGTG
CGGGTGGGCT TTGAGGACAA TGTGTATTAC CGCAAGGGCG AGTTGGCCAG CAGCAACGCC
CAGTTGGTGG CCCGCATCGC CCGTATCAGC CGCGAGCTGG ATCGCCCGGT CGCCAGTCCG
GATGAGGCGC GCGCCCTGCT GGGTTTGCGC CAGCGGCACT GA
|
|---|
| Protein sequence | MDKLIITAAL TGAEVTREQQ AALPITPEEI GRAAEECCQA GASMVHVHAR NADGSPTQDK
EVYRQIMAAV RARCDVIVQV STGGAVGMTP AERLAPVTLA PEMATLSMGS VNFGGDVFMN
HPADMAVFLQ AMQEHGVKPE LEIFDAGMLT TAHRWLKKGL LTGPLHFDFV LGIPGGMAGS
PEALMYLKAQ LPEGASWTVA GIGAAQLPLG TLAIVLGGHV RVGFEDNVYY RKGELASSNA
QLVARIARIS RELDRPVASP DEARALLGLR QRH
|
|---|
| |