| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_3869 |
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| Symbol | |
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| ID | 3961471 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | - |
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| Start bp | 4322931 |
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| End bp | 4323551 |
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| Gene Length | 621 bp |
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| Protein Length | 206 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 637918694 |
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| Product | hemolysin III family channel protein |
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| Protein accession | YP_525099 |
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| Protein GI | 89902628 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1272] Predicted membrane protein, hemolysin III homolog |
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| TIGRFAM ID | [TIGR01065] channel protein, hemolysin III family |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGTACGACG GCGAAAAATT CAACAGTGTC AGTCACCTGA TTGGCTCGGC ATTCTCCATC
TCTGGCCTGT CCATTCTGGT CACGGTGGCA GTCATGCAAG GCGATCCGTG GAAGGTGGTG
AGTTTCAGCA TCTATGGCAC GACGCTCGTG CTGCTGTATT GTTTCTCAAC CATTTACCAC
AGCATCCAGC ATCAGCGCGC CAAGGCGATT TTGCAAAAAA TCGACCACAA CGCCATCTAC
CTGCTGATTG CCGGCACCTA TACGCCGGTC GCGCTGGTCA CCCTGCGCGG ACCTTGGGGC
TGGACGCTGC TGGGTTTGAG TTGGGGGCTG GCGTTATTTG GTATTGCCCA GGAGCTGACG
CTGGGTCGCC ACACGCGTCG TCTGTCAATG CTGTTGTACC TGCTGATGGG TTGGCTGGTG
GTCATCGCCA TCAAGCCATT GACACACGTC ATGCCACTGG CCGGTCTGGT TTGGCTGGTG
GCGGGAGGCA TCGTGTACAG CCTGGGCATC TACTTCTACG TGTATGGTGA CCGCCGCCGC
CATTACCACG GCATTTGGCA CCTGTTTGTG CTGGGGGGCA GCTTCTGCCA TTTCATTTGC
ATCTTGCTGT ATGTGGCGTG A
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| Protein sequence | MYDGEKFNSV SHLIGSAFSI SGLSILVTVA VMQGDPWKVV SFSIYGTTLV LLYCFSTIYH
SIQHQRAKAI LQKIDHNAIY LLIAGTYTPV ALVTLRGPWG WTLLGLSWGL ALFGIAQELT
LGRHTRRLSM LLYLLMGWLV VIAIKPLTHV MPLAGLVWLV AGGIVYSLGI YFYVYGDRRR
HYHGIWHLFV LGGSFCHFIC ILLYVA
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