Gene Rfer_3816 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRfer_3816 
Symbol 
ID3960071 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodoferax ferrireducens T118 
KingdomBacteria 
Replicon accessionNC_007908 
Strand
Start bp4260453 
End bp4261085 
Gene Length633 bp 
Protein Length210 aa 
Translation table11 
GC content62% 
IMG OID637918642 
ProductDSBA oxidoreductase 
Protein accessionYP_525047 
Protein GI89902576 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG3917] 2-hydroxychromene-2-carboxylate isomerase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAACACA TCACCTTCTA TCTCGATTTC ATTTCACCTT ACGCCTATCT GGCTTTTGAA 
AAATTGCCCG AGGCGCTGAT GGGGCACAGT TACAGCGTGA GCTACAAACC GATCCTGCTG
GCCGCGCTGC TCAAGCACCA TGGGCAACTG GGGCCGGCCG AGATTGCGCC CAAGCGCGAC
TGGACCTACC GCCAGGTGCT GTGGCTGGCG CGCCGGCAGG GGGTGGAACT GCAGTTGCCA
GCCAGTCATC CATTCAATCC GCTGGCGCTG TTGCGGCTGG CCGTGGCCTG TGAGGCGCAG
GGTCTGCCCA ATCGTTACGT TTGCGAAACC CTGTTCAAAC ACGTCTGGCA GGGCGGCTTT
GACGCCACCG ATGCCCAGCG TTTGCAGGCA GTCAGCCAAC ACCTGGCGCC GCAGCGGGCT
CCCGACAGCG ACGCGGTCAA GGCGCAGCTG AAAGCACACA CGGATGAGGC TATCGCACGC
GGCGTTTTTG GCGTGCCGAC CTTTGAGGTC GATGGCAAGC TGTTTTGGGG TTTGGATGCC
TTGCCGATGC TGCAGGACTA TTTGGCCGGT GATGCCTGGT TTGCCACCGC ATGGAGCGCT
GCCGCCGCGG TGGCACCGGG GGTGCGGCGC TGA
 
Protein sequence
MKHITFYLDF ISPYAYLAFE KLPEALMGHS YSVSYKPILL AALLKHHGQL GPAEIAPKRD 
WTYRQVLWLA RRQGVELQLP ASHPFNPLAL LRLAVACEAQ GLPNRYVCET LFKHVWQGGF
DATDAQRLQA VSQHLAPQRA PDSDAVKAQL KAHTDEAIAR GVFGVPTFEV DGKLFWGLDA
LPMLQDYLAG DAWFATAWSA AAAVAPGVRR