Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rfer_3816 |
Symbol | |
ID | 3960071 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodoferax ferrireducens T118 |
Kingdom | Bacteria |
Replicon accession | NC_007908 |
Strand | - |
Start bp | 4260453 |
End bp | 4261085 |
Gene Length | 633 bp |
Protein Length | 210 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637918642 |
Product | DSBA oxidoreductase |
Protein accession | YP_525047 |
Protein GI | 89902576 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG3917] 2-hydroxychromene-2-carboxylate isomerase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAACACA TCACCTTCTA TCTCGATTTC ATTTCACCTT ACGCCTATCT GGCTTTTGAA AAATTGCCCG AGGCGCTGAT GGGGCACAGT TACAGCGTGA GCTACAAACC GATCCTGCTG GCCGCGCTGC TCAAGCACCA TGGGCAACTG GGGCCGGCCG AGATTGCGCC CAAGCGCGAC TGGACCTACC GCCAGGTGCT GTGGCTGGCG CGCCGGCAGG GGGTGGAACT GCAGTTGCCA GCCAGTCATC CATTCAATCC GCTGGCGCTG TTGCGGCTGG CCGTGGCCTG TGAGGCGCAG GGTCTGCCCA ATCGTTACGT TTGCGAAACC CTGTTCAAAC ACGTCTGGCA GGGCGGCTTT GACGCCACCG ATGCCCAGCG TTTGCAGGCA GTCAGCCAAC ACCTGGCGCC GCAGCGGGCT CCCGACAGCG ACGCGGTCAA GGCGCAGCTG AAAGCACACA CGGATGAGGC TATCGCACGC GGCGTTTTTG GCGTGCCGAC CTTTGAGGTC GATGGCAAGC TGTTTTGGGG TTTGGATGCC TTGCCGATGC TGCAGGACTA TTTGGCCGGT GATGCCTGGT TTGCCACCGC ATGGAGCGCT GCCGCCGCGG TGGCACCGGG GGTGCGGCGC TGA
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Protein sequence | MKHITFYLDF ISPYAYLAFE KLPEALMGHS YSVSYKPILL AALLKHHGQL GPAEIAPKRD WTYRQVLWLA RRQGVELQLP ASHPFNPLAL LRLAVACEAQ GLPNRYVCET LFKHVWQGGF DATDAQRLQA VSQHLAPQRA PDSDAVKAQL KAHTDEAIAR GVFGVPTFEV DGKLFWGLDA LPMLQDYLAG DAWFATAWSA AAAVAPGVRR
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