Gene Rfer_3760 details

Gene Information

• Locus tag: Rfer_3760
• ID: 3961109
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Rhodoferax ferrireducens T118
• Kingdom: Bacteria
• Replicon accession: NC_007908
• Strand: -
• Start bp: 4192474
• End bp: 4195803
• Gene Length: 3330 bp
• Protein Length: 1109 aa
• Translation table: 11
• GC content: 62%
• IMG OID: 637918586
• Product: acriflavin resistance protein
• Protein accession: YP_524991
• Protein GI: 89902520
• COG category: [V] Defense mechanisms
• COG ID: [COG0841] Cation/multidrug efflux pump

Plasmid Coverage information

• Num covering plasmid clones: 6
• Plasmid unclonability p-value: 0.663403
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCTATGA ATCACAAACC CCCGATGGGC GTTTCCGGGC GCATGGCGGC GGCCTTTCAG 
GCCAATGCCC TCACGCCTTT GCTGGCGCTG GTCGCCTTGT TGCTGGGCTT GTTTGCGGTG 
TTGGTGACGC CGCGCGAAGA AGAGCCGCAG ATCAATGTCA CGATGGCCAA CGTGCTGATT 
CCCTTTCCGG GCGCCAGCAG TGCCGATGTG CAGAACATGG TGGCGCGCCC GGCCGAGCAG 
GTGTTGAGCC AGATTGCCGG CATTGATCAC ACGTATTCGG TGGCACGACC CGGTCTGGCG 
ATACTCACTG TGCAGTTCAA GGTGGGGGTG CCGCGCACCG AAGCGCTGGT ACGTTTGTAC 
GATGTACTCA ACGCCAACCA GGACTGGCTG CCGCGCGACC TGGGTGCCCT GGCGCCGATT 
GTGAAACCCA AAGGGATTGA CGATGTGCCG GTGCTGGGCG TGACTTTGTG GAGTCGCGAG 
GCCTTGCCGG CGTTTGAGCT GGAACGGGTG GCGCATGCCG TGGAGGCTGA AATAAAAAGC 
GTGCCAGGCA CGCGTGAGGT GCATACCATC GGCGGGCCGG GCCGGGCCGT GCAGGTGTGG 
CTGGACCCGG TGCGCCTGCG CGAGCGCGGC GTTGACCTGC TCGCGCTCAA GGCATCGCTG 
GGGGCTTCCA ATTTTGGGAT GACGTCCGGC GCGGTGCTCG ATACCACTGG CAAATCGGTG 
CAAATGCTCA CGGTCGAGAC CGGTGAGTTC TTGCGTTCTG AGCAAGACGT GGGTGACCTG 
GTGGTGGGTG TGAGCAAAGG TTTGCCGGTC TATTTGCGCG AGGTGGCACG TATTGAGACC 
GGTGCCCAGC TACCGCAACG CTATGTCTGG TTTACGCCGG GTGCCGGGAC CTCGGCGACA 
GCGGCAGCGA AGCCGTCCAC GGCAAGTAGT GCCTCCGCGT CTGCCGCGCT GCAAGCCGGC 
AGCGTCTACC CGGCGGTGAC GATCAGCGTG ACCAAAAAGC CCGGTGAAAA CGCCGTCGAT 
GTGTCGAGCG CCGTGCGTGA TCGCATCGAT GCCCTGCGCA ACACGGTGAT TCCGTCCAAC 
ATCGAGACCA GCATCACGCG GGACTATGGT GAAACCGCGG CCGAGAAGGC CAACAAGCTG 
ATGCAAAAGC TGGCTTTTGC CACCGGCTCG GTCATCTTGC TGGTCGGCTT TGCCTTGGGT 
CGGCGCGAAG CGGTGATTGT GGGCGCTGCC GTGATTCTGA CGCTGACGGC CACGCTCTTT 
GCCTCCTGGG CCTGGGGCTT CACGCTCAAC CGCGTGTCGC TGTTTGCCTT GATTTTCTCG 
ATCGGCATTC TGGTGGACGA TGCCATTGTG GTGGTCGAGA ACATTCACCG GCACCAGCAA 
CTCTCGCCCG ACGCCACTTT GAAAGACATC ATTCCGCGCG CCGTTGATGA AGTCGGCGGC 
CCCACCATTC TGGCCACCCT GACGGTCATT GCCGCCTTGC TGCCGATGGC TTTTGTGTCG 
GGTTTGATGG GGCCCTACAT GAGCCCGATC CCGATCAATT CGAGCTTGGG CATGGCAATT 
TCACTGGCCA TTGCGTTCAC GGTCACACCC TGGCTGGCGC TGAAATTGAT GAAGCCGCAT 
GGCCACGCTG GCGGTGCGCA TGGCGGCGCC CAGGCCAAAG GACTGGGCCC CAAACTGCAG 
AAGCTGTTCA GCCGCGTGCT GGGCCCGTTC CTTGAAAGCG GGCGCAAGCG CTGGCTGCTG 
CTGGCCGGTA TTCTGGTGGC GCTGCTGCTC TCTATTGGCC TGACTTTGGT GCAGTGGGTG 
GTGATGAAGA TGCTGCCCTT TGACAACAAG AGCGAGTTTC AGGTGGTGGT GGAAATGCCG 
GCTGGCACCC CGCTGGAAAA TACGGCCGCC ACCTTGCATG AATTGGGCGC CTTTCTGGCA 
CAACAGCCCG AGGTGCTGAA CCTGCAGGCC TATGCCGGCA CCGCCTCGCC GATTACCTTC 
AACGGGCTGG TGCGGCAATA TTATTTCCGC TCGGACGCCG ATCAGGGCGA CCTGCAAGTG 
AACCTGGTCG ACAAGCACCA TCGCAGCGAA AAGAGCCACG TGATTGCACA ACGCTTGCGG 
GCCGACCTGG AAAAAATTGG CATCAAGCAC AACGCCCGCA TCAAGGTGGT GGAAGTGCCG 
CCCGGTCCGC CGGTGATGTC ACCCTTGGTG GCCGAGGTCT ATGGTCCGGA TGAGGCCGGA 
CGCCAGCAAC TGGCCGGTCG CCTGGCGCAA GCGTTTGCTG CCACGCCCGA TATTGTGGGG 
ATCGACACCT CGCTCAAGGA AAACGCGCCG CGGGCCTACC TGCGGGTGCG GCGCCAGCGT 
GCCGAGTCAC TGGGCATCCC GGTGGCCGTC ATTGCGCAAA CAGCAGCCAT GGCCTTGTCG 
GGGGTCGATG CGGCCTATCT GCACGATGGT CAGAGCAAAT ACCCGGTGCC GGTGCGCCTG 
CAATTGCCGC TGGAGTCCCA GGTCGGGCTC GACGCCTTGC TGGCGATGCC GCTGCGCGCC 
GCCAACGGCC AGATGGTGCC CCTAAGCGAA CTGGTCCAGG TCGAGCGCGG CGTGATCGAC 
AAGTCATTGT TCACCAAGGA CCTCAAGGGC GTGAGTTACG TGTTCGGCGA CATGGCGGGC 
AAGCTCGACT CGCCCTTGTA CGGTCTGTTT GCCATTCGCA GCAAGCTGGC CACCGCCGCC 
TTGCCGGGCA TGGGCGAGCT GGGTGAATAC TGGATTCACC AGCCGTCTGA TCCTTACCGC 
CAGTACGCCC TCAAGTGGGA CGGCGAATCG CAAATCACTT ATGAGACTTT CCGTGACATG 
GGCGCCGCCT ATGGTGTCGG GCTGATCCTG ATCTATTTGC TGGTGGTGGC GCAATTTCGC 
AGCTACCTGA CGCCACTGGT CATCATGGCG CCGATTCCGC TCACCATCAT TGGTGTGATG 
CCGGGCCACG CTTTGCTGGG CGCGCAGTTC ACCGCGACTT CCATGATCGG CATGATCGCG 
CTGGCCGGCA TCATCGTGCG CAATTCCATT TTGCTGGTTG ACTTTATCGA GCTGCAAGTC 
GAGCACGGCA TGGCGTTCAA GGCGGCGGTG GTCAACTCGG CCGCCGTGCG GGCGCAGCCG 
ATTGCGTTAA CGGGCCTGGC CGCCATGATC GGCGCCTTTT TCATTCTGGA CGACCCGATT 
TTCAACGGCT TGGCCGTGTC CCTGATTTTT GGCATTCTGG TGTCCACCTT GCTCACGCTG 
GTGGTGATAC CGGTTCTCTA TTACGCCTTG TACCGCAAGC GTATGGAATC GCGCGCAGAC 
GCGAATTCTT CTCTCGTGAA CCCCGTGTAA 

 

Protein sequence

MAMNHKPPMG VSGRMAAAFQ ANALTPLLAL VALLLGLFAV LVTPREEEPQ INVTMANVLI 
PFPGASSADV QNMVARPAEQ VLSQIAGIDH TYSVARPGLA ILTVQFKVGV PRTEALVRLY 
DVLNANQDWL PRDLGALAPI VKPKGIDDVP VLGVTLWSRE ALPAFELERV AHAVEAEIKS 
VPGTREVHTI GGPGRAVQVW LDPVRLRERG VDLLALKASL GASNFGMTSG AVLDTTGKSV 
QMLTVETGEF LRSEQDVGDL VVGVSKGLPV YLREVARIET GAQLPQRYVW FTPGAGTSAT 
AAAKPSTASS ASASAALQAG SVYPAVTISV TKKPGENAVD VSSAVRDRID ALRNTVIPSN 
IETSITRDYG ETAAEKANKL MQKLAFATGS VILLVGFALG RREAVIVGAA VILTLTATLF 
ASWAWGFTLN RVSLFALIFS IGILVDDAIV VVENIHRHQQ LSPDATLKDI IPRAVDEVGG 
PTILATLTVI AALLPMAFVS GLMGPYMSPI PINSSLGMAI SLAIAFTVTP WLALKLMKPH 
GHAGGAHGGA QAKGLGPKLQ KLFSRVLGPF LESGRKRWLL LAGILVALLL SIGLTLVQWV 
VMKMLPFDNK SEFQVVVEMP AGTPLENTAA TLHELGAFLA QQPEVLNLQA YAGTASPITF 
NGLVRQYYFR SDADQGDLQV NLVDKHHRSE KSHVIAQRLR ADLEKIGIKH NARIKVVEVP 
PGPPVMSPLV AEVYGPDEAG RQQLAGRLAQ AFAATPDIVG IDTSLKENAP RAYLRVRRQR 
AESLGIPVAV IAQTAAMALS GVDAAYLHDG QSKYPVPVRL QLPLESQVGL DALLAMPLRA 
ANGQMVPLSE LVQVERGVID KSLFTKDLKG VSYVFGDMAG KLDSPLYGLF AIRSKLATAA 
LPGMGELGEY WIHQPSDPYR QYALKWDGES QITYETFRDM GAAYGVGLIL IYLLVVAQFR 
SYLTPLVIMA PIPLTIIGVM PGHALLGAQF TATSMIGMIA LAGIIVRNSI LLVDFIELQV 
EHGMAFKAAV VNSAAVRAQP IALTGLAAMI GAFFILDDPI FNGLAVSLIF GILVSTLLTL 
VVIPVLYYAL YRKRMESRAD ANSSLVNPV