Gene Rfer_3726 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRfer_3726 
Symbol 
ID3963260 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodoferax ferrireducens T118 
KingdomBacteria 
Replicon accessionNC_007908 
Strand+ 
Start bp4157850 
End bp4158461 
Gene Length612 bp 
Protein Length203 aa 
Translation table11 
GC content65% 
IMG OID637918552 
Producthypothetical protein 
Protein accessionYP_524957 
Protein GI89902486 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1280] Putative threonine efflux protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCAACA CTGAACTCAG CACTCTGCTG CTGCTGTGCA CGGCGGCGAG CTTTACGCCC 
GGCCCCAACA CGACCTTGTC GACGGCGCTG GCGGCCAACC TGGGTTTGCG GCGCGCGCTG 
CGGTTCGTGG TGTCGGTGCC GGTCGGCTGG GGTCTGCTGT TCAGCCTGTG CGCGGGGGGC 
GTGGGGGCGA TGGTGCTGGC CCTGCCGGTA CTCCGGCTGG CGGTTCAAGC GCTTGGCGTG 
GCCTACCTGT TATGGCTGGC TTTCAAGCTG TTGAGAACCA ACACACTGGC GCAGGCCGAT 
ACCGCACAAC TCGATGTCAC GTTCTGGCAA GGTGTCATGT TGCAGTTTCT CAACATCAAG 
GCCTGGATGC TGGCCCTGAC CGTGGTGGCC GGTTGGCTTG CCGGGCGCGC CGACCTGCTC 
AGCCGCTTTG CCGTCATCCT GCCGCTGATG CTTTTGTTTG GCCTGTGCAG CAACCTGACC 
TACGCGCTGG TGGGCTCGCT ACTTCGCCAA TGGCTGGCCG ACCCCGAACA CGCCGGCAGA 
CGCTTGCGCT GGTTCAACCG CAGCATGGCC GCCGTGCTGG TGGCAACCGC CGGCTGGATG 
AGCACGTTTT AA
 
Protein sequence
MSNTELSTLL LLCTAASFTP GPNTTLSTAL AANLGLRRAL RFVVSVPVGW GLLFSLCAGG 
VGAMVLALPV LRLAVQALGV AYLLWLAFKL LRTNTLAQAD TAQLDVTFWQ GVMLQFLNIK 
AWMLALTVVA GWLAGRADLL SRFAVILPLM LLFGLCSNLT YALVGSLLRQ WLADPEHAGR 
RLRWFNRSMA AVLVATAGWM STF