| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_3720 |
|---|
| Symbol | |
|---|
| ID | 3963254 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodoferax ferrireducens T118 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007908 |
|---|
| Strand | + |
|---|
| Start bp | 4150195 |
|---|
| End bp | 4150926 |
|---|
| Gene Length | 732 bp |
|---|
| Protein Length | 243 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 637918546 |
|---|
| Product | flagellar L-ring protein |
|---|
| Protein accession | YP_524951 |
|---|
| Protein GI | 89902480 |
|---|
| COG category | [N] Cell motility |
|---|
| COG ID | [COG2063] Flagellar basal body L-ring protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAACATGA CTCAGCGCAC GATCCGCCTG CGCGAGCGGG CCCGCACCCT GTGGGGCGGC
GCACTGACAC TGGTTCTTGG CCTGACTCTG TCAGCCTGTG GCTCCCTGCC ACAACCCGTG
AACGTCGACT TTGTCCAGGC GGACACGGCC CCCCCCATGG CCGCTGCACC CGCCGCCAGC
CAGGCGGCAA GTGGCAGCCT GTTTCAAAAA GTGAGCTACC GCCCCTCTTT TGAAGATCCC
CGCGCCCGCA TGATCGGCGA CGTGGTCACG ATCAGGATCG TGGAAAACGT GGCCGCCAGC
CAGGTCTCGA AGTCAACCGC CAATCGCACC ACGTCTGGCG CTGCCAGCAT TTCCGCATTC
CCCTTGGTGT CACCCGCCGA TCTGCTGAAT CTGAAGGCCG GGGTCGGCAC CTCATCGGCC
AATGACTTTT CCGGCAAAGG CGGCACCGAG AGCGCCAACA CCTTTACCGG CACCATTACC
GCGACGGTGG TCAGAGTGCT ACCCAACGGG CATTTGGTTG TCACCGGCGA CAAGCAGATC
GGGGTCAACC AGAATGTGGA TGTGCTGCGC TTCTCGGGCA CCATCGACCC GCACCTGATA
CAACCGGGCA ACCTGATCAA CTCAAGCCAG GTCGCCAACG CCCGCATCGA ATCCAAGGGC
CGCGGCGCGC AGGCCGAAGC GCAAACAGTT GGCTGGTTAA CACGGTTCTT TTTCAGCTTT
CTCCCCTTCT AA
|
|---|
| Protein sequence | MNMTQRTIRL RERARTLWGG ALTLVLGLTL SACGSLPQPV NVDFVQADTA PPMAAAPAAS
QAASGSLFQK VSYRPSFEDP RARMIGDVVT IRIVENVAAS QVSKSTANRT TSGAASISAF
PLVSPADLLN LKAGVGTSSA NDFSGKGGTE SANTFTGTIT ATVVRVLPNG HLVVTGDKQI
GVNQNVDVLR FSGTIDPHLI QPGNLINSSQ VANARIESKG RGAQAEAQTV GWLTRFFFSF
LPF
|
|---|
| |