Gene Rfer_3666 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRfer_3666 
Symbol 
ID3963994 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodoferax ferrireducens T118 
KingdomBacteria 
Replicon accessionNC_007908 
Strand
Start bp4087028 
End bp4087510 
Gene Length483 bp 
Protein Length160 aa 
Translation table11 
GC content62% 
IMG OID637918482 
Productprotein tyrosine phosphatase 
Protein accessionYP_524897 
Protein GI89902426 
COG category[T] Signal transduction mechanisms 
COG ID[COG0394] Protein-tyrosine-phosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATATTC TCTTTTTGTG TACCGGTAAT TCCTGCCGCT CGATCCTGGC CGAGGCCACG 
TTCAATCACC TGGCACCCAA AGGCTGGCAC GCCATGAGCG CGGGCAGTCA CCCCAGCGGC
TATGTGCATC CGCGCTCACT GGCCTTGCTG GCGCGTGAGG GCATTGCGAC TGCAGGCTCT
GCCAGCAAGT CGTGGGACAA CTTGCCGCAA ACGCCAGACA TTGTGGTTAC CGTGTGTGCC
AACGCCGCCG GTGAAGTCTG CCCGGCTTAC CTGGGCCCGG TGTTGCGCAC CCACTGGGGT
GTCGAGGACC CGGTGCACGC CGTCGGCACC GACGCAGAAA TTGATGCCGC CTTCATGACG
GCCTACCGCA TCTTGCGCGC GCGCATTGAA GCTTTTTTGG CGCTGCCGCT GGATGCGCTG
CAGCACTACC CGCAAAAGCT CAAGGTCGAG CTGGATCACA TTGGCACTTT GCTGCCGGGT
TGA
 
Protein sequence
MNILFLCTGN SCRSILAEAT FNHLAPKGWH AMSAGSHPSG YVHPRSLALL AREGIATAGS 
ASKSWDNLPQ TPDIVVTVCA NAAGEVCPAY LGPVLRTHWG VEDPVHAVGT DAEIDAAFMT
AYRILRARIE AFLALPLDAL QHYPQKLKVE LDHIGTLLPG