| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_3595 |
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| Symbol | rplA |
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| ID | 3962587 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | - |
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| Start bp | 4007137 |
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| End bp | 4007832 |
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| Gene Length | 696 bp |
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| Protein Length | 231 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 637918411 |
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| Product | 50S ribosomal protein L1 |
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| Protein accession | YP_524830 |
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| Protein GI | 89902359 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0081] Ribosomal protein L1 |
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| TIGRFAM ID | [TIGR01169] ribosomal protein L1, bacterial/chloroplast |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.412655 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCCAGC TCACCAAAAA ACAAAAATCC TTCCAGGGAA AAGTTGACAG CAACAAGCTG
TATCCCCTGG CAGACGCATT GGGTCTCGTG AAAGAGTGTG CAACAGCCAA GTTCGATGAA
TCTATCGACG TGGCGGTTCA GCTCGGCATT GATGCCAAAA AGTCGGACCA AGTGGTGCGC
GGCGCTGTCG TGCTGCCCAA TGGCACTGGC AAGACCAAGC GCGTTGCGGT GTTTGCTCAG
GGTGCCAAGG CTGAAGAAGC CAAGGCGGCG GGCGCTGACA TCGTGGGTAT GGACGATTTG
GCCGCCATGA TCAAAGCCGG CGATATGCCG TTTGATATTG TGATTGCAGC GCCTGATGCG
ATGCGCGTTG TGGGCACCTT GGGTCAGATT CTCGGTCCAC GCGGATTGAT GCCTAACCCC
AAGGTGGGTA CCGTGACGCC GGACGTGGCA ACGGCTGTCA AGAACGCCAA GGCCGGTCAA
GTGCAGTTCC GCGTCGACAA AGCCGGTATC GTGCACTCCA CGATTGGCCG TCGCTCGTTC
GACACAGACA AGCTGCAGGG CAATCTGGCC GCGCTGGTAG ACGCTTTGAC CAAGGCCAAG
CCAGCTACGA GCAAGGGTGT TTATCTGAAA AAAGTGGCGG TTTCAAGCAC GATGGGTGTG
GGTATCCGTG TGGACCTGCA AAGCATCGCC GCGTAG
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| Protein sequence | MTQLTKKQKS FQGKVDSNKL YPLADALGLV KECATAKFDE SIDVAVQLGI DAKKSDQVVR
GAVVLPNGTG KTKRVAVFAQ GAKAEEAKAA GADIVGMDDL AAMIKAGDMP FDIVIAAPDA
MRVVGTLGQI LGPRGLMPNP KVGTVTPDVA TAVKNAKAGQ VQFRVDKAGI VHSTIGRRSF
DTDKLQGNLA ALVDALTKAK PATSKGVYLK KVAVSSTMGV GIRVDLQSIA A
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