Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rfer_3582 |
Symbol | |
ID | 3962573 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodoferax ferrireducens T118 |
Kingdom | Bacteria |
Replicon accession | NC_007908 |
Strand | - |
Start bp | 3986051 |
End bp | 3986818 |
Gene Length | 768 bp |
Protein Length | 255 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 637918397 |
Product | haloacid dehalogenase, type II |
Protein accession | YP_524817 |
Protein GI | 89902346 |
COG category | [R] General function prediction only |
COG ID | [COG1011] Predicted hydrolase (HAD superfamily) |
TIGRFAM ID | [TIGR01428] 2-haloalkanoic acid dehalogenase, type II [TIGR01493] Haloacid dehalogenase superfamily, subfamily IA, variant 2 with 3rd motif like haloacid dehalogenase |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACAAATA GCAGTTCATC CATTGCCGCC GTGCCCCGCG CCGTACTTTT TGACGCCTAC GGCACCTTGT TTGATGTGTA CAGCGTGGGC CAGTTGGCGG AGGAATTATT TCCCGGCCAT GGCCTGGCCC TGAGCGTGCT GTGGCGCGAC AAACAGATTG AATACACCCG GCTCGTGACC ACCAGCAACC ACGGGGCACA CTACCAGCCA TTTAGCGCCT TGACCCGTGC GGCCCTTGTT TACGCTATAA AAAAGATATC TACTGGCGCT TATTCGACAG CGGCTACAGG CCAATTTGAT ATAAATCTGG AGGCGGATTT CAAGGCCCGC CATGGAGAGC AAGTCGAGCG ACTGCTGGCG CAGTACCAGC ATTTAAGCGC CTTCCCGGAG AACCTGGCGG TGTTGCGCGA GCTCAAAGGC CGCGGCATCC CGACCGGCAT CCTGAGCAAC GGTGACGCCC CCATGCTGCA CGCTGCGGTG CAGTCGGCCG GCTTTGCGGG CCTGCTGGAT CACGTCATCA GTGTCGACCC GATCCGTCTC TACAAAACTG ACCCGCAAGC CTATGCGCTG GGTGAGCAGG CCACCGGATT CAAAGCCGAA CAAATCGTCT TTGTCAGCAG CAATGCCTGG GATGCGCTGG GCGCCACCTG GTACGGCTAC CAGACCCTGT GGGTCAACCG CTACCAACTG CCGTTTGAAG AGCTCGGCAC ACAGCCCACG CGTGTGGGCG GCAGCCTGCG TGCGGTGCTG GAATTTTTTC CCGCGTAA
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Protein sequence | MTNSSSSIAA VPRAVLFDAY GTLFDVYSVG QLAEELFPGH GLALSVLWRD KQIEYTRLVT TSNHGAHYQP FSALTRAALV YAIKKISTGA YSTAATGQFD INLEADFKAR HGEQVERLLA QYQHLSAFPE NLAVLRELKG RGIPTGILSN GDAPMLHAAV QSAGFAGLLD HVISVDPIRL YKTDPQAYAL GEQATGFKAE QIVFVSSNAW DALGATWYGY QTLWVNRYQL PFEELGTQPT RVGGSLRAVL EFFPA
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