| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_3553 |
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| Symbol | |
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| ID | 3961145 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | - |
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| Start bp | 3953013 |
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| End bp | 3954050 |
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| Gene Length | 1038 bp |
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| Protein Length | 345 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637918368 |
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| Product | transketolase |
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| Protein accession | YP_524788 |
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| Protein GI | 89902317 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0022] Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, beta subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.167542 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACGGACA ACAACACTCC CAACACAACC CCGATGACCA TGATCCAGGC GCTGCGCTCC
GCCATGGATG TGATGCTGGC GCGTGACAGC AACGTGGTCG TGTATGGCCA GGACGTGGGC
TATTTTGGCG GCGTGTTCCG CTGCACCGAA GGGCTGCAGC AGAAGTACGG CAACCAGCGC
GTGTTTGACG CCCCCATTTC CGAGGGCGGT ATTGTCGGCA CGGCCGTTGG CATGGCCGCC
TACGGCCTGC GCCCGGTGGT CGAGATTCAG TTTGCCGACT ATGTTTATCC CGCCACTGAT
CAGATCGTGT CGGAGGCGGC GCGCTTGCGT TACCGCTCGG CCGGTGACTT TACCTGTCCG
ATGACCATCC GCATGCCATG TGGCGGCGGC ATCTACGGCG GACAAACCCA CAGCCAGAGC
CCGGAGGCCA TGTTCACCCA GGTCTGCGGC CTGCGCACCG TGATGCCGTC CAATCCGTAT
GACGCCAAAG GGTTGCTGAT TGCGTCGATC GAGAACGACG ACCCGGTCAT CTTTCTGGAG
CCCAAGCGGC TCTACAACGG CCCGTTTGAT GGCCACCACG AGAAGCCGGT GGTGCCCTGG
TCCAAGCACC CGCTGGGTTT GGTGCCCGAG GGTTACTACA CCGTGCCGCT GGACTCGGCG
GCGGTCGTGC GGCCGGGGTC GGCGCTGACC GTGATTGCTT ACGGCACCAT GGTCTATGTG
GCCGAAGCGG CGGCGAACGA GAGCGGGGTG GACGCTGAAA TCATCGATCT GCGCAGCCTG
TGGCCGCTGG ACCTCGACAC CCTGGTGGCC TCGGTCAAAA AGACCGGCCG CTGCGTGATC
GTGCATGAGG CGACCCGCAC CAACGGGCTG GGCGCTGAAC TCTCAAGCCT GATTCAGGAG
CATTGTTTTT ACCACCTGCA AGCCCCGATT GAGCGTGTGG CGGGCTGGGA TACCCCTTAC
CCACACGCGC AGGAGTGGGC GTATTTCCCC GGGCCAGCGC GGGTTGCAGC GGCATTCAAA
CGTGTGATGG AGTCCTGA
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| Protein sequence | MTDNNTPNTT PMTMIQALRS AMDVMLARDS NVVVYGQDVG YFGGVFRCTE GLQQKYGNQR
VFDAPISEGG IVGTAVGMAA YGLRPVVEIQ FADYVYPATD QIVSEAARLR YRSAGDFTCP
MTIRMPCGGG IYGGQTHSQS PEAMFTQVCG LRTVMPSNPY DAKGLLIASI ENDDPVIFLE
PKRLYNGPFD GHHEKPVVPW SKHPLGLVPE GYYTVPLDSA AVVRPGSALT VIAYGTMVYV
AEAAANESGV DAEIIDLRSL WPLDLDTLVA SVKKTGRCVI VHEATRTNGL GAELSSLIQE
HCFYHLQAPI ERVAGWDTPY PHAQEWAYFP GPARVAAAFK RVMES
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