| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_3485 |
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| Symbol | |
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| ID | 3963204 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | + |
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| Start bp | 3876494 |
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| End bp | 3877675 |
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| Gene Length | 1182 bp |
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| Protein Length | 393 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637918302 |
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| Product | L-carnitine dehydratase/bile acid-inducible protein F |
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| Protein accession | YP_524722 |
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| Protein GI | 89902251 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1804] Predicted acyl-CoA transferases/carnitine dehydratase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAACCTC TCAAAGGCAT CACCATTGTC ACCCTGGAGC ACGCCATTGC GGCGCCCTTC
GCCACCCGCC AGCTGGCCGA CCTGGGTGCA CGCGTCATCA AGATCGAGCG CCCCGGCGTA
GGCGACTTTG CCCGCGGCTA CGACAACCGG GTGCGCGGCA TAGCCTCGCA CTTTGTCTGG
ACCAACCGCA GCAAGGAAAG CCTGACGCTT GATGTCAAGC ACCCCGAGGC GCAAAAAATC
CTCAAACGCA TCATCGACGA AGAAGCCGAC GTGGTGGTGC AAAACCTGGC TCCCGGTGCT
GCAGCCCGCC TGGGCCTGTC GTATGAGGTG TTGAGCCAGG CCAAGCCCGG CATCATCGTC
TGCGATATTT CCGGCTATGG CGACAACGGC CCTTACCGCG ACAAAAAAGC CTACGACCTG
CTGATCCAGA GCGAGGCCGG TTTTGTGTCC GTCACCGGCA CCGAAGACAC ACCTTCCAAG
GCCGGGCCAT CGATTGCCGA CATTGCCGCC GGTATGTATG CCTACACCAA CATCCTGGCC
GCACTGATGC ACCGCCAACA GACTGGCGAG GGCCAGCACA TCGACATTTC CATGCTCGAG
GCCCTGACCG AGTGGATGGG CTACCCGCTG TACTACAGCC TGGACGGTGC CGCGCCGCCC
AAGCGCACCG GTGCCAGCCA CGCCACCATC TACCCCTACG GCCCGTTCCC GGCTGGTGAC
GGCAAGACCG TGATGCTGGG CCTGCAAAAC GAACGCGAGT GGAAAGCCTT TTGCGAGCAA
GTGTTGCAGC AGCCCGAGTT GGCTGCAGAC GAGCGTTTTG CCAGCAACCC CAAGCGGGTG
GCGTTGCGCA CCACGCTGTA CGCGCTGATC GTGCAAACCT TCTCCAGCCT GAGCGCAGCG
CAAGTGGTGC AGCGCCTGGA AGCGGCGCAA ATTGCCAACG CCCAAGTCAA CACCATGGCC
GAGGTCTGGG CGCATCCGCA ACTTCAGGCA CGCAAGCGCT GGGCTTCGGT GGACACCTCG
GTGGGCACGG TGCCCGCCCT GCTGCCCCCG GGCTCCTGGA GCAAGGGTGC ACCCCGCATG
GATGCGGTGC CGGCCCTGGG TCAGCACACC GATGGCATTC TGGCCACGCT GGGCTACAGC
GCGGAACAAT TCGCCGCATT ACACGCTGAA GGTGCCGTGT GA
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| Protein sequence | MQPLKGITIV TLEHAIAAPF ATRQLADLGA RVIKIERPGV GDFARGYDNR VRGIASHFVW
TNRSKESLTL DVKHPEAQKI LKRIIDEEAD VVVQNLAPGA AARLGLSYEV LSQAKPGIIV
CDISGYGDNG PYRDKKAYDL LIQSEAGFVS VTGTEDTPSK AGPSIADIAA GMYAYTNILA
ALMHRQQTGE GQHIDISMLE ALTEWMGYPL YYSLDGAAPP KRTGASHATI YPYGPFPAGD
GKTVMLGLQN EREWKAFCEQ VLQQPELAAD ERFASNPKRV ALRTTLYALI VQTFSSLSAA
QVVQRLEAAQ IANAQVNTMA EVWAHPQLQA RKRWASVDTS VGTVPALLPP GSWSKGAPRM
DAVPALGQHT DGILATLGYS AEQFAALHAE GAV
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