Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rfer_3455 |
Symbol | |
ID | 3962562 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodoferax ferrireducens T118 |
Kingdom | Bacteria |
Replicon accession | NC_007908 |
Strand | - |
Start bp | 3845269 |
End bp | 3846570 |
Gene Length | 1302 bp |
Protein Length | 433 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 637918273 |
Product | sodium:dicarboxylate symporter |
Protein accession | YP_524693 |
Protein GI | 89902222 |
COG category | [C] Energy production and conversion |
COG ID | [COG1301] Na+/H+-dicarboxylate symporters |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAATGA ACAAGCTCAC AACGTGGATC ATCGTGGCCA TGCTGGCCGG CATCGCTGTC GGCTACGTTT GCCATGCCTT GGCACCTGAT GCTGCAGCCG CCAAGGAAAT TGCTGGCTAT TTCTCGATCT TCACCGACAT CTTCCTGCGA CTGATCAAGA TGATCATCGC CCCCCTGGTG TTTGGCACCC TGGTGGCTGG CCTGGCAGGC ATGGGCGATG CCAAGGCCGT GGGCCGCATC GGCGCCAAGG CCTTGGGCTG GTTTGTCAGC GCGTCCCTGT GTTCTCTGCT TATCGGCCTG ACCATGGCCA ATCTGTTGCG ACCGGGTGAC TCCGTTGGTG TGCCCTTGCC GGATGCCGGT ACCGTCACCA ACCTGAAGAC GGCGGCGCTC AACCTGAAGG ACTTCATCAC CCACGTCTTC CCAAGGAGCA TCTTCGAATC CATGGCCAAC AATGAGATTT TGCAGATTCT CATCTTTGCC CTGTTCTTTG GCGTGGCGCT GGGCAAGCTG CAGGACCGCA ATGCCAAGAG CCTGCTAAAG ACCACTGAGG AAATGGTTCA TGTGATGTTG CAGGTCACAG ACTACGTGAT GCGTTTCGCC CCGATCGGTG TTTTTGCCGC CGTGGCTGCC GTCATCACCA CACAGGGACT GGGCATCTTA CTGGTGTACG GCCGGTACAT GGGCAGCTTT TACCTCGCCC TGGCGACCTT GTGGTTGGTG GTGATCAGTG CTGGCTATTT TGTGTTGGGC AAGGACGTGT TCCGTCTCCT TAAACTGGTC CGTGGCCCCA TGCTGCTTGG CTTCTCCACC GCTAGCAGTG AATCTGCCTA CCCCAAGCTG ATGGAACAGC TGGAGAAGTT CGGCGTCAAA GACCGGGTCA CCGGTTTTGT TCTGCCCCTG GGCTATTCCT TCAATCTTGA TGGCTCGATG ATGTACACCA CTTTTGCTGC GTTGTTCATC TCGCAAGCCT ACAACATCCC CATGAGCCTC GGCCAGCAAG TCACCATGTT GCTGGTGCTG ATGGTTTCCT CCAAGGGCAT CGCTGGCGTC CCCCGTGCCT CCCTCGTGGT GGTGGCCGCC GTGTTGCCCA TGTTTGGTCT GCCGGAAGCT GGTCTGCTGC TGGTGCTGGG CGTGGATCAC TTCCTTGACA TGGGCCGCAC CGTGACCAAC ATTCTGGGCA ATGCCATCGC CACCGCTGTG GTCGCCAAGT GGGAAAACGC AATTGATCCG GTGAGTGACG AATTGGCCGA GTCCGAAGAA GTGCTGCCAT TGCCGCAAGA CATCGACATT GCGGTGGCCT GA
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Protein sequence | MKMNKLTTWI IVAMLAGIAV GYVCHALAPD AAAAKEIAGY FSIFTDIFLR LIKMIIAPLV FGTLVAGLAG MGDAKAVGRI GAKALGWFVS ASLCSLLIGL TMANLLRPGD SVGVPLPDAG TVTNLKTAAL NLKDFITHVF PRSIFESMAN NEILQILIFA LFFGVALGKL QDRNAKSLLK TTEEMVHVML QVTDYVMRFA PIGVFAAVAA VITTQGLGIL LVYGRYMGSF YLALATLWLV VISAGYFVLG KDVFRLLKLV RGPMLLGFST ASSESAYPKL MEQLEKFGVK DRVTGFVLPL GYSFNLDGSM MYTTFAALFI SQAYNIPMSL GQQVTMLLVL MVSSKGIAGV PRASLVVVAA VLPMFGLPEA GLLLVLGVDH FLDMGRTVTN ILGNAIATAV VAKWENAIDP VSDELAESEE VLPLPQDIDI AVA
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