| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_3413 |
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| Symbol | aroE |
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| ID | 3963339 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | + |
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| Start bp | 3797775 |
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| End bp | 3798611 |
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| Gene Length | 837 bp |
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| Protein Length | 278 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637918233 |
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| Product | shikimate 5-dehydrogenase |
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| Protein accession | YP_524653 |
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| Protein GI | 229220855 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0169] Shikimate 5-dehydrogenase |
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| TIGRFAM ID | [TIGR00507] shikimate 5-dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGTCTCTCG ATCTTTATTG CGTCATGGGC AATCCGGTGG CCCACAGCCG CTCACCCTGG
ATTCATGCCC GCTTTGCCGA ACTGACCGGG CAGGCCATGC ACTATGGCAG GCGTCACATT
GAACTGGACG ACTTTGCGCT GGCGGTGCAA ACCTTCATCC AAGAGGGCGG ACGCGGCTGC
AACATCACCG TACCGTTCAA ATTTGAAGCC GCCGCGCTGG CAACCCACAC CAGCGAGCGG
GCCAGCCTGG CGCAGGCGTC CAATACCCTG ACGTTCCAGC CGGGCCAGAT CCTGGCGGAC
AACACCGATG GCGCCGGACT GGTCGACGAC ATCCAGCAAG GCGCCGGGTT TGACCTGCAG
GGCAGACGCC TGCTGCTGAT CGGCGCCGGC GGTGCTGCCG CGGGCGTGCT CGGGCCCCTG
ATCCTGGCGC GACCGGCCAG CATCACCGTG GCCAACCGCA CGCTCCCGAA AGCCACTGCC
CTGGTTGAGC GCCATGCGGC ACTGGCAACG CTACAAGAAA CAGAGCTACT AACGCATGAT
CTGCGCGGAC TGCAGGGCAG TTTTGATGTG GTCATCAACG CCACGATGAG TAGCCTGAGC
GGCGCCGGTG TGCCGGTGGC GGGCAGCACA TTGAGGCCCG GTGGCCTGGC CTACGACATG
ATGTATGGCC CTGCCGCACA AGGCTTCATG ACCTGGGCGC GTGAACACGG CGCGCTGCCA
CGCGACGGCC TGGGCATGCT GGTGCGGCAG GCGGCCGAGT CCTTTTTGAT CTGGCGTGGT
GTGCGCCCGC CCGCGCAGCA GGTACTGGCC GAATTGCGCG CCGTCATGCA GCCCTGA
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| Protein sequence | MSLDLYCVMG NPVAHSRSPW IHARFAELTG QAMHYGRRHI ELDDFALAVQ TFIQEGGRGC
NITVPFKFEA AALATHTSER ASLAQASNTL TFQPGQILAD NTDGAGLVDD IQQGAGFDLQ
GRRLLLIGAG GAAAGVLGPL ILARPASITV ANRTLPKATA LVERHAALAT LQETELLTHD
LRGLQGSFDV VINATMSSLS GAGVPVAGST LRPGGLAYDM MYGPAAQGFM TWAREHGALP
RDGLGMLVRQ AAESFLIWRG VRPPAQQVLA ELRAVMQP
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