| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_3342 |
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| Symbol | |
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| ID | 3963041 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | - |
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| Start bp | 3709136 |
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| End bp | 3710500 |
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| Gene Length | 1365 bp |
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| Protein Length | 454 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637918162 |
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| Product | signal recognition particle protein |
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| Protein accession | YP_524582 |
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| Protein GI | 89902111 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0541] Signal recognition particle GTPase |
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| TIGRFAM ID | [TIGR00959] signal recognition particle protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCCTCCG CTCTCTCCGA CAAACTCTCG CGCCTCGTCA AAGAAATTCG AGGCCAGGCG
CGCATCACCG AAGCCAATGT GACCGACATG CTGCGTGAGG TGCGCATGGC CCTGCTGGAG
GCCGACGTGG CCTTGCCCGT GGTGCGCGAC TTTATTGCCC GCGTCAAGGA AAAGGCGCTG
GGCCAGGACG TGCTGGGCTC GCTTTCGCCG GGCCAGGCGC TGGTCAGTAT TGTCAACCGG
GAGCTCTCTA GCACCATGGG CGAGGGCGTG AGCGACATCA ATCTGGCCGC ACAACCTCCG
GCGGTCATTT TGATGGCGGG CTTGCAAGGT GCCGGCAAAA CCACCACCAC CGCCAAGTTG
GCCAAACACC TGATCGAAAA ACGCAAGAAG AAGGTGTTGA CGGTCTCGGG CGACGTCTAC
CGACCGGCGG CGATTGAACA GTTAAAAATG GTGACGGCGC AGGCCGGTGC CGAGTGGTTT
CCCAGCTCGC CGGATCAAAA ACCGGTGGCC ATTGCGCTGG CGGCGCTGGA CTATGCGCGC
AAACATTTCT TTGACGTGCT GCTGGTGGAC ACGGCCGGTC GCCTGGCCAT TGATGAAGCG
CTGATGCAGG AAATCAAGGC CCTGCATGCG GCCCTGAACC CGGTGGAAAC CCTGTTTGTG
GTCGACGCCA TGCAGGGCCA GGATGCGGTC AACACGGCCA AGGCATTTAA AGACGCGTTG
CCCTTGACCG GCATCATCCT GACCAAGCTC GACGGTGATT CACGCGGCGG CGCGGCGCTG
TCGGTGCGCC AGGTCACCGG CGCACCGATC AAGTTTGCCG GTACCAGCGA AAAGCTCGAC
GGCCTGGAAG TGTTTGACGC CGAGCGCCAC GCCGGGCGCA TCCTGGGCAT GGGCGACATT
CTGGCGCTGG TGGAGCAGGT CACCTCCGGT GTCGATATGG CCGCAGCGCA AAAGCTGGCG
GCCAAGGTCA AAAGCGGCGG CGGTTTTGAT TTAAATGACT TTCTGGCCCA GATTCAGCAA
ATGAAGCAGA TGGGGGGCCT GTCCAGTCTG ATGGACAAGT TACCCGCCTC CATGGCCGCG
AAAGCCGGTC AAATGGACAT GGGCCGGGTT GAAAAAGACA TTCAGCGCAA GCAAGGCATC
ATCCACAGCA TGACGCCGCT GGAGCGGCGC AAACCCGAGC TCATCAAGGC CACCCGCAAA
CGCCGCATTG CCGCTGGCGC GGGCGTGCAG GTGCAGGAAG TCAACCGCAT GCTCAAGGAG
TTCGAGCAGA TGCAGGACAT GATGAAAAAG ATGAAGGGCG GCGGCATGAT GAAAATGATG
AAGCGCATGG GCGGCATGAA GGGCATGCCG AAGATGCCGT TCTGA
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| Protein sequence | MASALSDKLS RLVKEIRGQA RITEANVTDM LREVRMALLE ADVALPVVRD FIARVKEKAL
GQDVLGSLSP GQALVSIVNR ELSSTMGEGV SDINLAAQPP AVILMAGLQG AGKTTTTAKL
AKHLIEKRKK KVLTVSGDVY RPAAIEQLKM VTAQAGAEWF PSSPDQKPVA IALAALDYAR
KHFFDVLLVD TAGRLAIDEA LMQEIKALHA ALNPVETLFV VDAMQGQDAV NTAKAFKDAL
PLTGIILTKL DGDSRGGAAL SVRQVTGAPI KFAGTSEKLD GLEVFDAERH AGRILGMGDI
LALVEQVTSG VDMAAAQKLA AKVKSGGGFD LNDFLAQIQQ MKQMGGLSSL MDKLPASMAA
KAGQMDMGRV EKDIQRKQGI IHSMTPLERR KPELIKATRK RRIAAGAGVQ VQEVNRMLKE
FEQMQDMMKK MKGGGMMKMM KRMGGMKGMP KMPF
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