Gene Rfer_3340 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRfer_3340 
Symbol 
ID3963039 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodoferax ferrireducens T118 
KingdomBacteria 
Replicon accessionNC_007908 
Strand- 
Start bp3707892 
End bp3708383 
Gene Length492 bp 
Protein Length163 aa 
Translation table11 
GC content59% 
IMG OID637918160 
Producthypothetical protein 
Protein accessionYP_524580 
Protein GI89902109 
COG category 
COG ID 
TIGRFAM ID[TIGR02532] prepilin-type N-terminal cleavage/methylation domain 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.707933 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTAGCT CACGCCAACA TGGCTTCACG CTGATCGAGC TCATCATCTT CATCGTGGTG 
GTGAGCGCCG GGCTGGCGGG CATTCTTTCG GTGATGAACA CCGTGGTCAA GTCCAGCGCC 
GACCCGATGG TGCGCAAGCA GACGATCGCC ATTGCCGAGT CCTTGCTGGA AGAGATTTTG 
CTGAAGGACT ATGCCAAACC AACCGGCAGC ACCGCGTTGG GATTTTCGGC CGGTGGAAGC 
CGCAAGCTGT TTGATTGCGT CACAGATTAC AGCGGCTACA ACACCACGAG CGGCATCGTG 
GATGTATTGG GCACCGTGAT GCCGGGTCTG GCGAGCTACA ACATTTCCCC CGTGACGGTG 
GCATCCAGCA CCGATTTGAC CGGCGTTGCT GCACTAAGGG TCACCGTGTC GGTAACCGAC 
CCGACCGGCA ATGCCGTCAG CCTCACGGGC TACCGGACTT GTGATTTGTC GCCGTCATGT 
CCACTGCCAT GA
 
Protein sequence
MTSSRQHGFT LIELIIFIVV VSAGLAGILS VMNTVVKSSA DPMVRKQTIA IAESLLEEIL 
LKDYAKPTGS TALGFSAGGS RKLFDCVTDY SGYNTTSGIV DVLGTVMPGL ASYNISPVTV 
ASSTDLTGVA ALRVTVSVTD PTGNAVSLTG YRTCDLSPSC PLP