| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_3316 |
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| Symbol | |
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| ID | 3962957 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | + |
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| Start bp | 3682835 |
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| End bp | 3683842 |
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| Gene Length | 1008 bp |
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| Protein Length | 335 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637918136 |
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| Product | luciferase-like |
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| Protein accession | YP_524556 |
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| Protein GI | 89902085 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG2141] Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases |
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| TIGRFAM ID | [TIGR03558] luciferase family oxidoreductase, group 1 |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.645597 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTGCACA TGATTCCCTT TTCAGTTCTC GACCTCTCCC CCATTGTGCA AGGTGGCGAC
GCGGCGCAGT CGTTTCGCAA CACCCTTGAC CTGGCCCAGC ACGCCGAACG CTGGGGCTAC
CAACGTTACT GGCTGGCGGA GCATCACGGC ATGCCGGGTA TTGCCAGTGC CGCGACTTCG
GTGCTCATTG GGCACGTGGC GGGCGGCACA TCCACGATTC GGGTCGGCGC GGGCGGCATC
ATGCTGCCCA ACCATTCGCC GCTGGTCATC GCCGAGCAAT TTGGCACCCT GGAATCGCTC
TACCCTGGCC GCATTGACCT CGGGCTGGGC CGTGCGCCCG GCTCGGACCA GACCACCGCG
CGCGCGCTAC GCCGCAACCT GGCGTCGGAC GCCGACGAGT TTCCGCGCGA TGTGGTCGAA
CTGATGGATT ATTTTTCAAA GGAATCAATC AACCCGGTGC ATGCGGTGCC AGGCCAGGGT
TTGAATGTGC CGATCTGGAT TCTGGGCTCC AGCCTGTTTG GCGCGCAACT GGCCGCCGTG
CTGGGTCTGC CCTATGCTTT CGCCTCCCAC TTCGCACCCC AACAGATGAT GCAGGCGATT
GATCTGTACC GGACCAGCTT CTCGCCTTCA ACGCACCTGG CAAAACCCTA CGTCATGCTT
GGCTTTAACG TGTTCGCCGC CGATAGCGAC GAAGAAGCAG CTTTTCGGGC CACCTCGATG
CAGCAGGCCT TTGTCAACCT GCGCAGCGGT CGCCCGGCCC GGCTGCCCCC GCCGCTAGCC
GGCTACGCCA ACCGTGTGGG TCCAGCCGAG CGAGCCTTGC TTGAGAGCGT TTTGTCGTGC
TCGGCCATTG GTGCGCCGGG CACCGTGCGC GCCAGCCTGA AGGCATTTAT CGAGCGCACC
GGGGCCGATG AGTTGATGAT CACGTCGCAA ATTTATGAAC ATTCGGCGCG GCTGCGGTCT
TATGAGATCA CATCGGGGAT TTTTGCTGAG AAAAAGGAGA GACCATGA
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| Protein sequence | MLHMIPFSVL DLSPIVQGGD AAQSFRNTLD LAQHAERWGY QRYWLAEHHG MPGIASAATS
VLIGHVAGGT STIRVGAGGI MLPNHSPLVI AEQFGTLESL YPGRIDLGLG RAPGSDQTTA
RALRRNLASD ADEFPRDVVE LMDYFSKESI NPVHAVPGQG LNVPIWILGS SLFGAQLAAV
LGLPYAFASH FAPQQMMQAI DLYRTSFSPS THLAKPYVML GFNVFAADSD EEAAFRATSM
QQAFVNLRSG RPARLPPPLA GYANRVGPAE RALLESVLSC SAIGAPGTVR ASLKAFIERT
GADELMITSQ IYEHSARLRS YEITSGIFAE KKERP
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