| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_3269 |
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| Symbol | |
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| ID | 3960806 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | - |
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| Start bp | 3623980 |
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| End bp | 3626808 |
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| Gene Length | 2829 bp |
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| Protein Length | 942 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637918089 |
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| Product | formate dehydrogenase, alpha subunit |
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| Protein accession | YP_524509 |
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| Protein GI | 89902038 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3383] Uncharacterized anaerobic dehydrogenase |
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| TIGRFAM ID | [TIGR01591] formate dehydrogenase, alpha subunit, archaeal-type |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.964291 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGGTCT CCGCCAAACC GGCTGAAGTC AAGCTGCCAA CGCTTGCGTT CAAGCTCGAC
CAGCAGACCC TGCAGGCGTT TGAAGGGGAA ACCATCCTCA AGGCGGCGCA GCGTCACGGC
GTCGACATTC CCCATCTTTG CCACAAGGAC GGCTTGCGTG CCGACGGCAA CTGCCGCGCC
TGTGTCGTGG AGATCAAGGG TGAGCGCACC CTGGCGCCGA GTTGCTGCCG AACTGTGACG
GCGGGTATGG AGGTGCAGGC CAACAGCGAA CGCGCGGTGA AGAGCCGCAA GATGGTGCTG
GAGCTGCTGC TGTCGGACAT GCCTGCTGTG GGGCACAAGT GGAATGACGC GAACGCAAGC
ACGGGTTCGG TCGGCCAGCA CGGTGAACTC AGCGCTTGGG CGTCACGAAT GGGCGTCACC
GTGCGTCCCG AACTCCAGGC TTTGCGCCGC GCGCAACCGG CAACGGACCT GTCGCATCCG
GCGATGGCGG TCAACCTCGA TGCCTGCATT CAATGCACCC GCTGCGTGCG CGCCTGCCGC
GAGGTGCAGG TGAACGACGT CATCGGTTAT GCCCATCGTG GCGCGCAGAG CCAGATTGTG
TTTGACCTCA ATGACGCCAT GGGCGACAGC AGCTGCGTGG CCTGCGGCGA ATGCGTGCAG
GCCTGCCCCA CGGGCGCGTT GATGCCCAAG ACGCAGATGG GATCGCAGGC GCTGGATAAG
ACCGTGGACT CGGTATGCCC CTTCTGCGGC GTCGGTTGCC TGCTGACTTA CAAAGTCAAG
AACAATAAAA TCATCAGCGT CGACGGCCGC GACGGTCCGG CCAACCAAAG CCGCCTGTGC
GTCAAAGGCC GCTTTGGTTT TGACTATGTG CACCACCCGC ACCGGCTCAC GACGCCCCTG
ATCCGGCGCG CCGATGTGCC CAAAGACATG GCCGTGACGC GCGACCCGGC GGACTGGGCC
AGCGTGTTCC GCGAAGCCAC CTGGGACGAG GCGCTGGACC TCGCGGGCGC CACGCTCAAA
GGCTTGCGCG ATACCCATGG CAGGAAAGCA CTGGCCGGCT TTGGTTCGGC CAAGGGCAGC
AACGAAGAAG CTTATTTGTT CCAGAAACTG GTGCGCACCG GCTTCGGCTC CAACAATGTG
GACCACTGCA CGCGCCTGTG CCACGCCTCC AGTGTGGCGG CGCTGCTCGA AGGCATTGGC
TCGGGTGCCG TGAGCAACCA GGTCAATGAT GTGGACCACG CCGAGCTGAT TCTGGTGATT
GGCTCCAACA CCGCTGGCAA CCACCCGGTG GCCGCCACCT GGATGAAGAA TGCGGCCAAA
CGCGGCTTGA AGATTGTGAC GGCGGACCCG CGTGGCACGG ACCTGGACAA ACATGCGTGG
CGCAAGCTCC AGTTCAAGGC CGACACCGAC GTGGCGCTGA TCAACGCCAT GATCCACACC
ATCATTGAAG AGGGCCTGGC CGACGCCGCT TTCATCTCCG CGCGCGTGTC CAATTTTGAG
GCGCTGCGTG ACAGCGTGCG CGCCTTCAGC CCGCAGGCCA TGGCGCCGGT CTGTGGCGTC
CCGGCCGCTG CCATCCGCGA GGTGGCGCGC GCCTATGCCA GGGCCAAAGC AGCGATGATC
TTTTGGGGTA TGGGCGTCAG CCAGCATGTG CACGGCACCG ACAACGTGCG CAGCCTGATG
GCGCTGTGCC TGGTGGCGGG GCAGATTGGC AAGCCGGGCT CCGGCCTGCA TCCCTTGCGC
GGACAAAACA ATGTGCAGGG CGCCAGTGAC GCCGGCCTGA TCCCGATGAT GTTTCCCAAT
TACCAGCGCG TGGACGATTC CGCTGCACAC CAGTGGTTTG AGGATTTTTG GGGCATGACG
CTGGATGATC AGCCCGGCTA TACCGTGGTC GAAATCATGC ACAAGGCGCT GGCACCCGAG
AGCGACCCGC ACAAGGTGCG CGGCATGTAC ATCATGGGCG AGAACCCGGC CATGAGCGAC
CCCGACCTGA ACCAGGCGCG CCGCGCGCTG GCATCGTTGT CGCATCTGGT GGTGCAGGAT
ATTTTCATGA CCGAGACTGC CTGGCTGGCC GATGTGGTGT TGCCCGCCGG CGCCTGGCCC
GAGAAGACCG GCACGGTCAG CAACACCGAC CGCATGCTGC AACTGGGCCG CCAGGCGATC
GATCCGCCGG GGGACGCCCG GCCTGATTTG TGGATCATCC AGCAGATCGC CCATCGCATG
GGGTTGACCT GGAACTACCC GGGTGAGAAC TGCGGTGTGG CTCTAGTCTA CGAAGAAATG
CGCCAGACCA TGCACACGGC CATTGGCGGC ATCAGCTGGG AGCGTCTGCA GCGCGAGGGC
AGTGTGACCT ATCCCTGTTT GAATGCCGAC GATCCCGGTC TGGCCACCGT GTTCACTGAC
CATTTCCCCA CCCCCGATGG CCGCGCGCAC CTGGTGCCCA CGACGCTGAC CCTGGCGGCC
GAGAAACCCG ATGCAGCCTA CCCGCTGGTA CTGATCACCG GGCGGCAACT GGAGCACTGG
CACACCGGCA GCATGACACG CCGCTCTGCC GTGCTGGATG CGCTGGAGCC GGTGGCCACC
GCCTCGGTCA ATGCCGGTGA GCTCGCGCGC CTGGGCTTGA CGGCGGGCGC CATGGTCACG
CTGCGCAGCC GTCGCGGCAC GCTGGACGTG CAACTTCGGC GCGATGACGG CACCCCTGAC
GGCACCGTGT TCATGCCCTT TGCCTACCGC GAGGCCGCAG CCAATTTGCT GACCCATGCG
GCGCTCGACC CGTTCGCGAA AATTCCGGAG TTCAAATACT GCGCGGTGTG CATCACGCCC
GTCAGCTGA
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| Protein sequence | MKVSAKPAEV KLPTLAFKLD QQTLQAFEGE TILKAAQRHG VDIPHLCHKD GLRADGNCRA
CVVEIKGERT LAPSCCRTVT AGMEVQANSE RAVKSRKMVL ELLLSDMPAV GHKWNDANAS
TGSVGQHGEL SAWASRMGVT VRPELQALRR AQPATDLSHP AMAVNLDACI QCTRCVRACR
EVQVNDVIGY AHRGAQSQIV FDLNDAMGDS SCVACGECVQ ACPTGALMPK TQMGSQALDK
TVDSVCPFCG VGCLLTYKVK NNKIISVDGR DGPANQSRLC VKGRFGFDYV HHPHRLTTPL
IRRADVPKDM AVTRDPADWA SVFREATWDE ALDLAGATLK GLRDTHGRKA LAGFGSAKGS
NEEAYLFQKL VRTGFGSNNV DHCTRLCHAS SVAALLEGIG SGAVSNQVND VDHAELILVI
GSNTAGNHPV AATWMKNAAK RGLKIVTADP RGTDLDKHAW RKLQFKADTD VALINAMIHT
IIEEGLADAA FISARVSNFE ALRDSVRAFS PQAMAPVCGV PAAAIREVAR AYARAKAAMI
FWGMGVSQHV HGTDNVRSLM ALCLVAGQIG KPGSGLHPLR GQNNVQGASD AGLIPMMFPN
YQRVDDSAAH QWFEDFWGMT LDDQPGYTVV EIMHKALAPE SDPHKVRGMY IMGENPAMSD
PDLNQARRAL ASLSHLVVQD IFMTETAWLA DVVLPAGAWP EKTGTVSNTD RMLQLGRQAI
DPPGDARPDL WIIQQIAHRM GLTWNYPGEN CGVALVYEEM RQTMHTAIGG ISWERLQREG
SVTYPCLNAD DPGLATVFTD HFPTPDGRAH LVPTTLTLAA EKPDAAYPLV LITGRQLEHW
HTGSMTRRSA VLDALEPVAT ASVNAGELAR LGLTAGAMVT LRSRRGTLDV QLRRDDGTPD
GTVFMPFAYR EAAANLLTHA ALDPFAKIPE FKYCAVCITP VS
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