Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rfer_3256 |
Symbol | |
ID | 3960793 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodoferax ferrireducens T118 |
Kingdom | Bacteria |
Replicon accession | NC_007908 |
Strand | - |
Start bp | 3610355 |
End bp | 3611197 |
Gene Length | 843 bp |
Protein Length | 280 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637918076 |
Product | formate dehydrogenase, subunit FdhD |
Protein accession | YP_524496 |
Protein GI | 89902025 |
COG category | [C] Energy production and conversion |
COG ID | [COG1526] Uncharacterized protein required for formate dehydrogenase activity |
TIGRFAM ID | [TIGR00129] formate dehydrogenase family accessory protein FdhD |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.340615 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGCTGCCGT ATCTGACCCA GGCCCGCGCG CCGCTGACGC GTGAGGTGAC TGCGCTCAAT GAATGGGGTG ACGTGGACAC GGTCTCCATC CCGGCTGAGC GCGCGCTCAC CGTTTATGTC GACAAGCGCG AATTGGTGAC GCTGATGACG CTGGGCGCCC AGCCCGAGCT GCTGGTGCTG GGCTTCTTGC GCAACCAGCG CCTGGTGCAA TCGGTGCAGG AGATCGAATC CATTACCGTC GATTGGGACG TGGGCGCCGC TGCCGTCAAA ACGCGCCAGG GCATCTCGGA CATTGAAGCG CGCACCGCCA AACGGGTGGT CACCACCGGT TGCGGCCAGG GCAGCGTGTT TGGTGACCTG ATGGCGGAGG TGGACCGTCT GGTGCTGCCG GCGGCCACGC TGACGCAAAA GCAGCTGTAC GGCATCGTCA ACGCCATCCG GCTACAAGAG ACCACCTACA AGTCATCCGG CTCCGTGCAT GGCTGTGCCT TGTTTCGGGG CGAAGAAATG TTGGTATTCG TGGAAGATGT GGGCCGCCAC AACGCGATTG ACACCATTGC GGGCTGGATG TGGCTGCAAT CCGATGAGGC CATGAGCGGT CAGGATAAAG TTTTTTACAC CACCGGCCGC CTGACCAGCG AGATGGTGAT CAAGTCGGCG CAAATGGGGG TGCCGATTGT GGTGTCGCGC AGCGGCATCA CCCAAATGGG GCACGACGTG GCGCAGCGCC TGGGTTTGTG CGCCATTGGC CGCGCCACCA ACAAGCGTTT TCTTTGCTAC AGCGCCGCCG AGCGCTTGCT GCTGCAGCCT GGCCTGGTGG GCGCCCGGCT CGCCGCCGCC TGA
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Protein sequence | MLPYLTQARA PLTREVTALN EWGDVDTVSI PAERALTVYV DKRELVTLMT LGAQPELLVL GFLRNQRLVQ SVQEIESITV DWDVGAAAVK TRQGISDIEA RTAKRVVTTG CGQGSVFGDL MAEVDRLVLP AATLTQKQLY GIVNAIRLQE TTYKSSGSVH GCALFRGEEM LVFVEDVGRH NAIDTIAGWM WLQSDEAMSG QDKVFYTTGR LTSEMVIKSA QMGVPIVVSR SGITQMGHDV AQRLGLCAIG RATNKRFLCY SAAERLLLQP GLVGARLAAA
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