| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_3255 |
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| Symbol | |
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| ID | 3960792 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | - |
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| Start bp | 3607726 |
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| End bp | 3610245 |
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| Gene Length | 2520 bp |
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| Protein Length | 839 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637918075 |
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| Product | hypothetical protein |
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| Protein accession | YP_524495 |
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| Protein GI | 89902024 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG3127] Predicted ABC-type transport system involved in lysophospholipase L1 biosynthesis, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.0335123 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACATTT CTTTCTGGCG CCTTGGCGCT CGCTCTTTAT GGCGCGACCT GCGCTCCGGT
GAACTTCGAT TGCTGATCGT GGCGGTCACG CTGGCGGTGG CGGCCTTGAC CGCGGTCGGT
TTCTTTGCCG ATCGGCTCAA GGGCGGTCTA CAACGCGATG CGCGGCAGCT GCTTGGCGGT
GATGCGCTCA TTTCAAGCGA CAACGCCACA CCCGCCGCGT TTGCCGAGAA AGCGCGCGCG
CTGGGCCTGG ACGTGGTGCA GACGCTGGCT TTCCCGACCA TGGCGCGCGC GCCGCAGGCC
CTGGGTGGCG CCAGCAAACT GGTGGCCCTG AAGGTGGTGG AGCCCGGTTA TCCGCTGCGC
GGCAGTTTGC GGGTCAGCAG CCAGCCGGGT GGACCCGGCA GCATCACCGC CACCATTCCC
CAGCCCGGCG AGGCCTGGAT CGACGCGCCC GTGCTGGATG CTCTTCGGGC GCAGATGGGA
GATGCCTTGC TGCTGGGTGA CAGCAGTTTG CGCATTGCCA AAATTATTGT CAGCGAGCCG
GACCGGGGTG CTGGTTTCAT GAATTTTGCG CCGCGCGTCA TGATCAACCG CGCCGATGTG
GCGGCCACCG GACTGATCCA GCCCGCCAGC CGTCTGACTT ACCGCCTGGC CGTTGCTGGC
GCCGACAAAA GCGTTACTAC GTTTGTCGAC TGGGCCCAGC TTGAGGTCAA AAAGCCCCAG
GTGCGCGGCG TGCGCGTGGA GTCGCTGCAA GGCGGGCGCC CGGAACTGGG GCAGACACTG
GCGCGCGCCG AGAAGTTCCT CAATCTGATT GCCTTGCTGG CGGCGCTCTT GAGTGCCGTG
GCGGTGGCGC TGGCAGCGCG TGGTTTTGCG GCCAAGCACC TCGACGATTG CGCCATGCTG
CGCGTGCTGG GTTTGAGCCA GCGCAGCATT GCCGCCAGTT ATGCCTTTGA GTTCACACTG
ATCGGCTTGC TGGCCAGTTC GCTCGGGGTG GCCATCGGCT ACGCGGTGCA TTACGCGTTT
GTGCTGCTGT TGGCCGGTCT GGTGGCTGCG GCGCTGCCGC CGGCGGGCCT GTGGCCGGTC
ATTTTCGGCC TGGGCATGGG CTTGACGCTG TTGCTGGCCT TCGGCCTGCC GCCGGTCCTG
CAACTGGCGC AGGTGCCGCC GCTGCGCGTG ATCCGCCGGG ATGTGGGCAA CCTCAAACCC
GCCTCGCTGG GTGTGCTGGG TCTGGGCGTG GCTGGTTTTG CGGTGCTGCT GCTGGCCGCC
AGCAGTGATG TCAAGCTCGG TCTGATCGCG GTGGGGGGCT TTGCTGCGGC CACCGTGCTG
TTTGCGGTCT TGAGCTGGGG CGCGGTCGTG CTGCTGCGCC GTGTGGTCAA CGAGCGCACC
GCGCCGCGCG CCGTGATTCT GGCCATGCGG CAGATTTCGG CTCGTCCGGC GTATGCCGTG
GTGCAGGTCA GCGCGCTGGC GCTCGGCTTG CTGGCGCTGG TGCTGCTGGT GTTGTTGCGC
ACCGACCTGA TCAACAGTTG GCGCCAGGCC ACGCCGTTGG ACGCGCCGAA CCGCTTTGTC
ATCAACGTCA TGCCCGAGCA GGGCGATGCG TTCGGGGCCG CCCTGCGCGC TGCGGGGGTG
AGCAAATTTG ACTGGTATCC CATGATTCGA GGCCGTCTGG TGGCGATCAA CGGCCGGGCG
GTGACACCCG ACGACTATGC AGACGACCGC GCCAAACATC TGGTGGACCG CGAGTTCAAC
CTGTCCAACA GCGCGAAGAA GCCGGCTCAG AATGAATTGG TGGCCGGTCG CTGGATTGAA
GAGGAGCCCG GCGCCATCAG CGTGGAAGAA GGGATTGCCA AAACACTGGG TCTCAAGATC
GGCGACAGCC TGAACTTTGA CGTCGGCGGG CAGCAGATTC AATCCAGAAT CACCTCCCTG
CGCAAAGTGG ACTGGGGCTC GATGCGGGCC AATTTTTTTG TCATGTACCC GGTGAGTACA
CTGCCCGATG TGCCCAGCAC CTTCATGAGC GCCTTCAAGG CGCCAGCCAC ACCTGGTTTT
GACAACACCC TGGTGCGCGC TTTCCCCAAC ATCACCAGCG TCGACATGAC GGCCACGCTG
GCGCAGGTGC AGCGCGTGCT CGATCAGGTG ATTGGCGCGG TGGAGTTCTT GTTTGCCTTT
ACCCTGGCGG CCGGCCTGGT GGTGCTGTTT GCCGCCGTGA CCGCCACGCG CGAGGAGCGC
GCCCGTGAAT TTGCCATCAT GCGCGCCGTC GGCGCCAAAA GCAGCCTGCT GCGCCAGGTG
CAACGGATCG AGCTGATCGG CGTGGGCTTG CTGGCCGGTT TTCTGGCCTC CATCGTCGCC
AGCGCGGTCG GTTGGGCACT GGCGCGCTAT GTGTTTGAGT TTGACTGGAT CGTCTCGCTC
TGGGTGCCGC TGCTGGGGTC CCTGAGTGGT GCGCTGCTGG CGCTGGCGGC CGGCTGGTGG
GGTCTGCGTG ACGTGTTGCG CCGCCCGGTG GTGGAGACAC TGCGGCGGAC GGCACAGTAG
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| Protein sequence | MNISFWRLGA RSLWRDLRSG ELRLLIVAVT LAVAALTAVG FFADRLKGGL QRDARQLLGG
DALISSDNAT PAAFAEKARA LGLDVVQTLA FPTMARAPQA LGGASKLVAL KVVEPGYPLR
GSLRVSSQPG GPGSITATIP QPGEAWIDAP VLDALRAQMG DALLLGDSSL RIAKIIVSEP
DRGAGFMNFA PRVMINRADV AATGLIQPAS RLTYRLAVAG ADKSVTTFVD WAQLEVKKPQ
VRGVRVESLQ GGRPELGQTL ARAEKFLNLI ALLAALLSAV AVALAARGFA AKHLDDCAML
RVLGLSQRSI AASYAFEFTL IGLLASSLGV AIGYAVHYAF VLLLAGLVAA ALPPAGLWPV
IFGLGMGLTL LLAFGLPPVL QLAQVPPLRV IRRDVGNLKP ASLGVLGLGV AGFAVLLLAA
SSDVKLGLIA VGGFAAATVL FAVLSWGAVV LLRRVVNERT APRAVILAMR QISARPAYAV
VQVSALALGL LALVLLVLLR TDLINSWRQA TPLDAPNRFV INVMPEQGDA FGAALRAAGV
SKFDWYPMIR GRLVAINGRA VTPDDYADDR AKHLVDREFN LSNSAKKPAQ NELVAGRWIE
EEPGAISVEE GIAKTLGLKI GDSLNFDVGG QQIQSRITSL RKVDWGSMRA NFFVMYPVST
LPDVPSTFMS AFKAPATPGF DNTLVRAFPN ITSVDMTATL AQVQRVLDQV IGAVEFLFAF
TLAAGLVVLF AAVTATREER AREFAIMRAV GAKSSLLRQV QRIELIGVGL LAGFLASIVA
SAVGWALARY VFEFDWIVSL WVPLLGSLSG ALLALAAGWW GLRDVLRRPV VETLRRTAQ
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