Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rfer_3253 |
Symbol | |
ID | 3960790 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodoferax ferrireducens T118 |
Kingdom | Bacteria |
Replicon accession | NC_007908 |
Strand | + |
Start bp | 3606593 |
End bp | 3607246 |
Gene Length | 654 bp |
Protein Length | 217 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637918073 |
Product | Smr protein/MutS2 |
Protein accession | YP_524493 |
Protein GI | 89902022 |
COG category | [S] Function unknown |
COG ID | [COG2840] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
|
Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.669843 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGACCAAGC CCGTCAAGGT CAAAGCTTTG ACCGACCTCA AGGTGGTCAA AAAGGCCATC GCCGAGAAAG CCAGGCAGCG CACCGAGCAG GCCAGCGCCC AGGTGAAAGC CGTCAAGCAG GCCGCCAGTG ACAAGGATTT GTTCGTCAGG GCCGCTGGAG CCGTCCAGCC CCTGCCAGAC AAGCGCAAGG TGCTACATAA AGTGGAGCCA AAGATGCCGC TGGCGATGCA GTACCAGAAG GATGAAAAAG CGGTACTGCG TGAGGCCATC AGCGACGAGT TTGATGTGTC AACCCTGCTG GAAACCGACG AACATTTGAG CTTTCGCCGC CCCGGCATTG GCCCGGATGT GACGCGCAAG TTGCGCCGGG GAGACTGGTC GATCCAGCGT CAACTGGACC TGCACGGCCT GCGCCGCGAC GATGCCCGCG AAGTGTTAAG CCTCTTCATC CGCGAGGCGC ACAAACACGG CATTCGCTGC GTGCGCGTGA TCCACGGCAA AGGGCTGGGC TCGCCCGGCA AAGCGCCGAT CCTGAAAAGC CGGGTGCACA GCTGGCTGGT GCAGAAAACC GAAGTGCTGG CCTTTGTGCA GGCCAAACCG GCCGATGGGG GCGCTGGTGC GCTGGTGGTG CTGCTGATGG CATCGCGCGG GTAA
|
Protein sequence | MTKPVKVKAL TDLKVVKKAI AEKARQRTEQ ASAQVKAVKQ AASDKDLFVR AAGAVQPLPD KRKVLHKVEP KMPLAMQYQK DEKAVLREAI SDEFDVSTLL ETDEHLSFRR PGIGPDVTRK LRRGDWSIQR QLDLHGLRRD DAREVLSLFI REAHKHGIRC VRVIHGKGLG SPGKAPILKS RVHSWLVQKT EVLAFVQAKP ADGGAGALVV LLMASRG
|
| |