Gene Rfer_3253 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRfer_3253 
Symbol 
ID3960790 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodoferax ferrireducens T118 
KingdomBacteria 
Replicon accessionNC_007908 
Strand
Start bp3606593 
End bp3607246 
Gene Length654 bp 
Protein Length217 aa 
Translation table11 
GC content62% 
IMG OID637918073 
ProductSmr protein/MutS2 
Protein accessionYP_524493 
Protein GI89902022 
COG category[S] Function unknown 
COG ID[COG2840] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.669843 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCAAGC CCGTCAAGGT CAAAGCTTTG ACCGACCTCA AGGTGGTCAA AAAGGCCATC 
GCCGAGAAAG CCAGGCAGCG CACCGAGCAG GCCAGCGCCC AGGTGAAAGC CGTCAAGCAG
GCCGCCAGTG ACAAGGATTT GTTCGTCAGG GCCGCTGGAG CCGTCCAGCC CCTGCCAGAC
AAGCGCAAGG TGCTACATAA AGTGGAGCCA AAGATGCCGC TGGCGATGCA GTACCAGAAG
GATGAAAAAG CGGTACTGCG TGAGGCCATC AGCGACGAGT TTGATGTGTC AACCCTGCTG
GAAACCGACG AACATTTGAG CTTTCGCCGC CCCGGCATTG GCCCGGATGT GACGCGCAAG
TTGCGCCGGG GAGACTGGTC GATCCAGCGT CAACTGGACC TGCACGGCCT GCGCCGCGAC
GATGCCCGCG AAGTGTTAAG CCTCTTCATC CGCGAGGCGC ACAAACACGG CATTCGCTGC
GTGCGCGTGA TCCACGGCAA AGGGCTGGGC TCGCCCGGCA AAGCGCCGAT CCTGAAAAGC
CGGGTGCACA GCTGGCTGGT GCAGAAAACC GAAGTGCTGG CCTTTGTGCA GGCCAAACCG
GCCGATGGGG GCGCTGGTGC GCTGGTGGTG CTGCTGATGG CATCGCGCGG GTAA
 
Protein sequence
MTKPVKVKAL TDLKVVKKAI AEKARQRTEQ ASAQVKAVKQ AASDKDLFVR AAGAVQPLPD 
KRKVLHKVEP KMPLAMQYQK DEKAVLREAI SDEFDVSTLL ETDEHLSFRR PGIGPDVTRK
LRRGDWSIQR QLDLHGLRRD DAREVLSLFI REAHKHGIRC VRVIHGKGLG SPGKAPILKS
RVHSWLVQKT EVLAFVQAKP ADGGAGALVV LLMASRG