Gene Rfer_3251 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRfer_3251 
Symbol 
ID3960599 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodoferax ferrireducens T118 
KingdomBacteria 
Replicon accessionNC_007908 
Strand
Start bp3604874 
End bp3605668 
Gene Length795 bp 
Protein Length264 aa 
Translation table11 
GC content61% 
IMG OID637918071 
Producthypothetical protein 
Protein accessionYP_524491 
Protein GI89902020 
COG category[E] Amino acid transport and metabolism
[T] Signal transduction mechanisms 
COG ID[COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAACTAC GCTATATGGG CAGCTTGATG CTCGCGCTGT GCGCCATTGC CACCTCAGTG 
GCGGCCGGGC CTGACTGCTC GCGTCCTCTC ACGCTTGCCT TGCATGACCA CGGTCTGCTC
TACTCGGCCG ATACCGACGC AGGCATCGAC AAGGATTTTG CCGATGAACT GATCCGCCGC
AGCGGCTGCA AAATTGCCGT CAGCCTCATG TCGCGCGCGC GCATCTGGCA GCTGATCGAG
TCCGGCGCGC TCGATTTCAG CCTGTCTGGT ATCACCAACG CCGAGCGCAA CCGGTTTGCC
GGCTTTGCCT GGTATTTCAG CAACAAATAC TATTTGCTGG TGCGCCGGGA CTCCGGTGTG
CGCCAGTTGG CCGACTTCGA GCGCAGTGAC CCGTTTCGGC TCGGGGTCAT CCGCAGCTTT
CGCTACAGCG AGTCCGCCAA CCGACTGGTC GACAAACTCA CGCTCGCCAA CCGCGTCAGC
CAGGCCAATG GCCTGGCGCC GCTGTATGAG ACGCTGTTGC TCAACCGCAT TCAGGGCATG
ATCATTGAGC CCTTCGACTA CCCGGCGCTG GACCAGAAGA AGATTCGCGA CATCACTTCC
GTTATTGAGT TTGACGACCC GGCGGTGCCC CACGGCCTCA TCATGTCAAA GAAGGCCTTG
AGTCCGGCCG AGCAGGACAA GTGGCGCGCG TTGGTCAACG ACATGCGCGC CGATGGCACC
GTGCGGCGCA TCTTCGAGAA ATACTTTGAT CCCGGACTCG CCGCCGCCCT CGTTGCTTTC
CAGCCCCCGC CATGA
 
Protein sequence
MKLRYMGSLM LALCAIATSV AAGPDCSRPL TLALHDHGLL YSADTDAGID KDFADELIRR 
SGCKIAVSLM SRARIWQLIE SGALDFSLSG ITNAERNRFA GFAWYFSNKY YLLVRRDSGV
RQLADFERSD PFRLGVIRSF RYSESANRLV DKLTLANRVS QANGLAPLYE TLLLNRIQGM
IIEPFDYPAL DQKKIRDITS VIEFDDPAVP HGLIMSKKAL SPAEQDKWRA LVNDMRADGT
VRRIFEKYFD PGLAAALVAF QPPP