Gene Rfer_3155 details

Gene Information

• Locus tag: Rfer_3155
• Symbol: lpxK
• ID: 3962551
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Rhodoferax ferrireducens T118
• Kingdom: Bacteria
• Replicon accession: NC_007908
• Strand: +
• Start bp: 3492187
• End bp: 3493254
• Gene Length: 1068 bp
• Protein Length: 355 aa
• Translation table: 11
• GC content: 65%
• IMG OID: 637917974
• Product: tetraacyldisaccharide 4'-kinase
• Protein accession: YP_524395
• Protein GI: 89901924
• COG category: [M] Cell wall/membrane/envelope biogenesis
• COG ID: [COG1663] Tetraacyldisaccharide-1-P 4'-kinase
• TIGRFAM ID: [TIGR00682] tetraacyldisaccharide 4'-kinase

Plasmid Coverage information

• Num covering plasmid clones: 17
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACCCAGC CAACCCAATC TTCAACCTGG CAACAACACC TGACCCGCGC CTGGACACAC 
CGCGGCTGGC TGGCCTGGCT GTTGTGGCCC ATCTCGCTGC TGTATGGCGT GCTGGTCAAG 
TTACGCCGCA GTCTGTACCA GGCAGGCATC TTCAAATCAG AGCGCGTGCC GGTCCCGGTG 
ATCGTGGTCG GCAATGTGGT GGCGGGCGGC GCTGGCAAGA CCCCGGTGGT CATGATGGTT 
GTGCGGCACT TGCAGGCGCG CGGCCTGCAA GTGGGGGTGA TCTCGCGCGG CTATGGCCGC 
CAGACCCACG ACTGCCGCGA GGTGTGTTCT GACAGCGCGA TTACCGACGT CGGCGACGAG 
CCGGCCCTGA TCCAGCGCAG CACGGCCGCG CCCGTGTTTG TCGCCAGCCG CCGGGTTGAC 
GCCGCTCGCG CGCTGCTGGC GCGCTACGCG CAAACGCAGG TCATCGTCTG TGACGACGGC 
TTGCAACACC TGGGCCTGCA GCGCGACCTG GAGATTTGTG TGTTTGACGA GCGCGGCGTC 
GGCAATGGCT TTTTGCTGCC CGCCGGCCCC TTGCGTGAAC CCTGGCCGCG CGCGGTGGAC 
CTGGTGCTGC ACACCGGCAC ACCGCCCGCT TTTGCCGGTT TCTCTGCCCA GCGCACGCTC 
AGCCGCTACG CGCTGATGGC TGACGGCAGC CAGCAGGCAC TCGGCGATCT GGCTGGCCCA 
ACCTGCCTGT GCAACAAGCC CCTGCTGGCT TTGGCCGCCA TTGCCAAGCC GGAAAATTTT 
TTCACCATGC TGCGCGCCCA GGGCTTGACC TTGGCACGCA CCCTCGCGCT GCCGGACCAC 
TACGGTTTTG ATAGCTGGTC ACACAATGAC TACGAGGGCT ACACCCTGAT TTGCACCGAA 
AAAGATGCGG TTAAATTGTG GCCGCTAGAA CCTGATGCCC TGGCCGTGCC GCTGGTCGTC 
ACGCCAGAGC CCGCCTTTCT GGCGCAACTC GACGCCCGCC TCGACCGCCT GCTGCCGACA 
GATCCCTCGC CAACGCTATC ATTAGCCCAT GGACACACGA CTACTTGA 

 

Protein sequence

MTQPTQSSTW QQHLTRAWTH RGWLAWLLWP ISLLYGVLVK LRRSLYQAGI FKSERVPVPV 
IVVGNVVAGG AGKTPVVMMV VRHLQARGLQ VGVISRGYGR QTHDCREVCS DSAITDVGDE 
PALIQRSTAA PVFVASRRVD AARALLARYA QTQVIVCDDG LQHLGLQRDL EICVFDERGV 
GNGFLLPAGP LREPWPRAVD LVLHTGTPPA FAGFSAQRTL SRYALMADGS QQALGDLAGP 
TCLCNKPLLA LAAIAKPENF FTMLRAQGLT LARTLALPDH YGFDSWSHND YEGYTLICTE 
KDAVKLWPLE PDALAVPLVV TPEPAFLAQL DARLDRLLPT DPSPTLSLAH GHTTT