Gene Rfer_3153 details

Gene Information

• Locus tag: Rfer_3153
• ID: 3962549
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Rhodoferax ferrireducens T118
• Kingdom: Bacteria
• Replicon accession: NC_007908
• Strand: +
• Start bp: 3490628
• End bp: 3491293
• Gene Length: 666 bp
• Protein Length: 221 aa
• Translation table: 11
• GC content: 63%
• IMG OID: 637917972
• Product: MotA/TolQ/ExbB proton channel
• Protein accession: YP_524393
• Protein GI: 89901922
• COG category: [U] Intracellular trafficking, secretion, and vesicular transport
• COG ID: [COG0811] Biopolymer transport proteins

Plasmid Coverage information

• Num covering plasmid clones: 19
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

TTGCGCGGCA TTTCATCTGC GCGGAGACCC CATTTGTTTT CAATCATACA AGCCGCAGGC 
TGGCCGATCT GGCCGCTGGT TGCCTGCTCT ATCCTGGCCC TGGCGCTCGT CATTGAGCGC 
TTTGTCAGTC TCAAGACGAT CAAAATCGCA CCGCCCCAAT TGCTCGACGA GGTACTCACC 
ATCACGCGCA CGGTGGTGCC GACGCCCGAT GTCGTGAATC AGCTGGCGCA AAACTCGGCC 
TTGGGTGAAG TGCTGGCCAG CGGCTTGCGC GCGCTCAACA GCCACCCGCG TTGCAGCGAG 
GACGAGCTGC GCTCCACCAT GGAGAGCACC GGTCGCCTGG TCGCGCACCG GCTGGAAAAA 
TACCTGAACG CGCTCGCCAC CATTGCCTCG GCGGCGCCGC TGATGGGCTT GTTTGGCACG 
GTCGTGGGCA TGATCGAGAT TTTTGGCTCG CAGTCGACGC CCGGCGGCGC GACCGGGGGC 
AACCCGGCGC AACTGGCGCA TGGCATTTCG ATTGCGCTCT ACAACACCGC GTTTGGCCTG 
ATCGTGGCCA TTCCGTCGCT GATTTTCTGG CGCTACTTCC GGGCGCGCGT CGACGAGTAC 
CTGCTGACGC TGGAACTGGC GTCGGAGCGG CTGGCACGCC ACCTCAACAC ATTACGCAAG 
CCATGA 

 

Protein sequence

MRGISSARRP HLFSIIQAAG WPIWPLVACS ILALALVIER FVSLKTIKIA PPQLLDEVLT 
ITRTVVPTPD VVNQLAQNSA LGEVLASGLR ALNSHPRCSE DELRSTMEST GRLVAHRLEK 
YLNALATIAS AAPLMGLFGT VVGMIEIFGS QSTPGGATGG NPAQLAHGIS IALYNTAFGL 
IVAIPSLIFW RYFRARVDEY LLTLELASER LARHLNTLRK P